Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g084920.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35160.1 | Solyc02g084920.2.1 | AT3G60820.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000736 | Potato | cytosol | 62.06 | 90.51 |
| PGSC0003DMT400095923 | Potato | cytosol | 91.33 | 85.53 |
| VIT_03s0038g03090.t01 | Wine grape | cytosol | 62.33 | 65.16 |
| Solyc01g111900.2.1 | Tomato | cytosol | 62.06 | 64.15 |
| VIT_03s0038g03080.t01 | Wine grape | cytosol | 56.37 | 56.83 |
| KRH31595 | Soybean | cytoskeleton, cytosol, endoplasmic reticulum | 56.1 | 56.56 |
| CDX72522 | Canola | cytosol | 43.36 | 50.0 |
| Bra017700.1-P | Field mustard | cytosol | 49.32 | 49.59 |
| CDY09082 | Canola | cytosol | 26.56 | 49.49 |
| Bra038396.1-P | Field mustard | cytosol | 48.51 | 48.77 |
| CDY67664 | Canola | cytosol | 42.28 | 48.75 |
| Bra034677.1-P | Field mustard | cytosol | 48.51 | 48.64 |
| CDX76316 | Canola | cytosol | 43.36 | 48.48 |
| AT4G35160.1 | Thale cress | cytosol | 50.14 | 48.43 |
| CDY09084 | Canola | cytosol | 44.44 | 48.24 |
| Bra017699.1-P | Field mustard | cytosol | 47.7 | 48.09 |
| CDX72521 | Canola | cytosol | 42.55 | 48.01 |
| AT4G35150.1 | Thale cress | cytosol | 42.28 | 48.0 |
| CDY17512 | Canola | cytosol | 44.72 | 46.48 |
| CDY17514 | Canola | cytosol | 43.36 | 45.85 |
| CDY51573 | Canola | cytosol | 48.51 | 45.55 |
| CDY67665 | Canola | cytosol | 32.79 | 43.21 |
| Bra034678.1-P | Field mustard | cytosol | 31.17 | 40.93 |
| Solyc06g060220.1.1 | Tomato | cytosol | 12.47 | 39.32 |
| Solyc06g060200.1.1 | Tomato | cytosol | 13.28 | 38.89 |
| Solyc06g083450.2.1 | Tomato | cytosol | 21.95 | 35.22 |
| Solyc03g080180.2.1 | Tomato | extracellular | 30.35 | 31.37 |
| Solyc06g007960.2.1 | Tomato | cytosol | 28.73 | 29.36 |
| Solyc10g005060.2.1 | Tomato | cytosol | 28.46 | 28.85 |
| Solyc10g085830.1.1 | Tomato | plastid | 27.1 | 27.7 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0008757 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019438 | GO:GO:0032259 | GO:GO:0046983 |
| InterPro:IPR016461 | InterPro:IPR036388 | UniProt:K4DBZ9 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 |
| PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF98 | InterPro:Plant_MeTrfase_dimerisation |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | EnsemblPlantsGene:Solyc12g009110.1 | EnsemblPlants:Solyc12g009110.1.1 | UniParc:UPI000276982C |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr12:-:2431857..2435319
Molecular Weight (calculated)
40569.7 Da
IEP (calculated)
5.428
GRAVY (calculated)
-0.089
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKETNGKAK TNDEKIQESH EAQANMWKFV FGFTEMAVIK CAIELGIADF LEKNQEPISL NQLSIALGCC STSLYRILRF LINRGIFKET STKSGKNGYV
101: QTPLSRLLIK EGENSMAAFL LFESSPVMLA PWHNLSARIS SKDNSTPSFD AAHGKDIWKY AEADSGLSNL LNNAMACDAK VAVSAIIDGC PEIFEGVNTM
201: VDVGGGDGTT LRLLVEAFPW INGINLDLPH VASVAPHAIG VVHFGGDMFN YVPKADAAFL MWVLHDWGDE ECIQILTKCR EAIPKDKGKV IILEAIIGEK
301: EENNIIRGSN NEKLKDVGLM LDMVMMAHTS NGKERTSKEW AYVLNEAGFG RHTISHINAV QSVIQAYPS
101: QTPLSRLLIK EGENSMAAFL LFESSPVMLA PWHNLSARIS SKDNSTPSFD AAHGKDIWKY AEADSGLSNL LNNAMACDAK VAVSAIIDGC PEIFEGVNTM
201: VDVGGGDGTT LRLLVEAFPW INGINLDLPH VASVAPHAIG VVHFGGDMFN YVPKADAAFL MWVLHDWGDE ECIQILTKCR EAIPKDKGKV IILEAIIGEK
301: EENNIIRGSN NEKLKDVGLM LDMVMMAHTS NGKERTSKEW AYVLNEAGFG RHTISHINAV QSVIQAYPS
001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
Arabidopsis Description
ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.