Factsheet for Bra017700.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003428.1-P
Bra007565.1-P
Bra014468.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35160.1	Bra003428.1-P	AT3G60820.1	21798944
AT4G35160.1	Bra007565.1-P	AT3G60820.1	21798944
AT4G35160.1	Bra014468.1-P	AT3G60820.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67664	Canola	cytosol	86.38	99.06
Bra017699.1-P	Field mustard	cytosol	90.74	90.98
Bra034677.1-P	Field mustard	cytosol	90.74	90.49
AT4G35150.1	Thale cress	cytosol	75.48	85.23
Bra034678.1-P	Field mustard	cytosol	64.31	83.99
AT4G35160.1	Thale cress	cytosol	86.1	82.72
Bra038396.1-P	Field mustard	cytosol	77.66	77.66
PGSC0003DMT400000736	Potato	cytosol	36.78	53.36
VIT_03s0038g03090.t01	Wine grape	cytosol	50.41	52.41
PGSC0003DMT400047988	Potato	cytosol	49.05	50.42
VIT_03s0038g03080.t01	Wine grape	cytosol	50.14	50.27
Solyc01g111900.2.1	Tomato	cytosol	48.5	49.86
Solyc12g009110.1.1	Tomato	cytosol	49.59	49.32
PGSC0003DMT400047989	Potato	cytosol	45.23	49.26
KRH31595	Soybean	cytoskeleton, cytosol, endoplasmic reticulum	48.77	48.91
PGSC0003DMT400095923	Potato	cytosol	49.05	45.69
Bra033498.1-P	Field mustard	cytosol	24.52	30.72
Bra026320.1-P	Field mustard	cytosol	23.98	29.73
Bra003682.1-P	Field mustard	cytosol	28.61	29.66
Bra019031.1-P	Field mustard	cytosol	28.61	28.61
Bra003007.1-P	Field mustard	cytosol	28.34	28.57
Bra011292.1-P	Field mustard	cytosol	28.88	28.42
Bra003009.1-P	Field mustard	cytosol	26.98	28.29
Bra029041.1-P	Field mustard	cytosol	27.79	28.02
Bra035482.1-P	Field mustard	cytosol	27.79	28.02
Bra003681.1-P	Field mustard	extracellular	25.61	27.89
Bra035481.1-P	Field mustard	cytosol	26.98	27.81
Bra025875.1-P	Field mustard	cytosol	28.07	27.61
Bra012269.1-P	Field mustard	cytosol	27.52	27.37
Bra008316.1-P	Field mustard	cytosol	27.79	27.2
Bra025874.1-P	Field mustard	cytosol	27.52	27.15
Bra015664.1-P	Field mustard	cytosol	24.52	27.11
Bra033733.1-P	Field mustard	cytosol	28.07	27.03
Bra008313.1-P	Field mustard	cytosol	28.07	27.03
Bra016432.1-P	Field mustard	cytosol	27.25	26.74
Bra027815.1-P	Field mustard	cytosol	27.52	26.72
Bra016433.1-P	Field mustard	cytosol	26.98	26.61
Bra012268.1-P	Field mustard	cytosol	26.7	26.56
Bra010226.1-P	Field mustard	cytosol	27.52	26.51
Bra022700.1-P	Field mustard	cytosol	25.89	26.32
Bra015719.1-P	Field mustard	cytosol	26.43	26.22
Bra040689.1-P	Field mustard	cytosol	25.61	26.18
Bra003707.1-P	Field mustard	cytosol	25.07	25.7
Bra012270.1-P	Field mustard	cytosol	26.16	25.53
Bra003680.1-P	Field mustard	cytosol	25.34	24.6

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	ProteinID:AAQ01577	ProteinID:AAQ01577.1	EMBL:AY337013
EnsemblPlantsGene:Bra017700	EnsemblPlants:Bra017700.1	EnsemblPlants:Bra017700.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	UniProt:M4DMG5	InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746
PANTHER:PTHR11746:SF98	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI0002540B4C
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	:	:	:	:

Description

AT4G35160 (E=3e-187) | O-methyltransferase family 2 protein

Coordinates

chrA03:-:29829402..29832944

Molecular Weight (calculated)

40958.9 Da

IEP (calculated)

6.375

GRAVY (calculated)

0.015

Length

367 amino acids

Sequence
(BLAST)

001: MEKSKRNLLY EEAKASLDIW RYVFGFADIA AAKCAIDLKI PEAIENHPSS LPVTLAELSV AVSASPSHLH RIMRFLVHQG IFKQVPIKDG LATGYTNTPL
101: SRLMMITKRD GKSLAPFVLF ETSPEMLAPW LRLSSVVASP ANGSHPPPFD AVHGKDVWAL AEDNPCLSHM INEAMACDTR RVVPRVARAC HDLFEGVATV
201: VDVGGCTGET MGILVKEFPW IKGFNFDVPH VIQVAQVLDG VENVGGDMFD SVPKCDAVLI KWVLHDWGDK DCIRILKNCK EAVPPNIGKV LIVESVIREK
301: KKAMIVEDRD EKLEHVRLML DMVMMAHTTT GKERTLKEWD FVLNEAGFAR YEVRDIDDVQ CVIIAYR

Best Arabidopsis Sequence Match ( AT4G35160.1 )
(BLAST)

001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS

Arabidopsis Description

ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.