Factsheet for HORVU6Hr1G092780.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	65.44	60.54
CDY70033	Canola	cytosol	61.03	36.09
TraesCS6A01G405200.1	Wheat	cytosol	89.71	33.61
TraesCS6D01G388700.1	Wheat	cytosol	89.71	32.97
TraesCS6B01G449400.1	Wheat	cytosol	89.71	32.97
EES06050	Sorghum	cytosol, plastid	83.82	30.24
Zm00001d051870_P001	Maize	cytosol	82.35	29.95
Os02t0823400-01	Rice	cytosol	80.15	29.86
Bra040689.1-P	Field mustard	cytosol	63.97	24.23
KRH13467	Soybean	cytosol	63.24	24.16
AT3G53140.1	Thale cress	cytosol	63.24	23.96
CDX95399	Canola	cytosol	63.24	23.96
KRH21852	Soybean	cytosol, nucleus	62.5	23.94
VIT_08s0007g04520.t01	Wine grape	cytosol	62.5	23.74
PGSC0003DMT400022143	Potato	cytosol	58.82	22.16
Solyc10g085830.1.1	Tomato	plastid	58.82	22.16
HORVU7Hr1G088940.1	Barley	cytosol	36.03	21.68
HORVU1Hr1G011930.1	Barley	cytosol	41.91	16.19
HORVU1Hr1G003370.2	Barley	cytosol	41.18	15.82
HORVU2Hr1G119660.1	Barley	cytosol	41.18	15.47
HORVU4Hr1G001250.1	Barley	cytosol	40.44	15.36
HORVU7Hr1G119480.2	Barley	cytosol	39.71	15.13
HORVU7Hr1G082280.1	Barley	cytosol	39.71	15.0
HORVU1Hr1G089700.1	Barley	cytosol, vacuole	36.76	13.66
HORVU3Hr1G116770.1	Barley	cytosol	38.97	13.15
HORVU1Hr1G089620.1	Barley	cytosol	34.56	12.53
HORVU3Hr1G049400.1	Barley	cytosol	13.24	11.18
CDX76223	Canola	cytosol	18.38	9.33
HORVU6Hr1G092840.2	Barley	cytosol	12.5	5.78

Protein Annotations

EnsemblPlants:HORVU6Hr1G092780.2	EnsemblPlantsGene:HORVU6Hr1G092780	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	InterPro:IPR016461
InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	InterPro:SAM-dependent_MTases	PANTHER:PTHR11746	PANTHER:PTHR11746:SF90	PFAM:PF00891
PFscan:PS51683	SUPFAM:SSF53335	UniParc:UPI000B469244	UniProt:A0A287V7H2	MapMan:50.2.1	:

Description

No Description!

Coordinates

chrchr6H:+:578237918..578238719

Molecular Weight (calculated)

15204.3 Da

IEP (calculated)

5.207

GRAVY (calculated)

-0.074

Length

136 amino acids

Sequence
(BLAST)

001: FLPLQIRLGQ QADVLGVKHV GGDMFKSIPS GDAIFMKWVL TTWTNDECTA ILKKCHDALP DGGKLVACEP VVPETTDAST RTRALLENDI FVMTTYRTQG
101: RERSEEEFRQ LGIAAGFAGF RALYLDPFYA LLEYVK

Best Arabidopsis Sequence Match ( AT3G53140.1 )
(BLAST)

001: MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK

Arabidopsis Description

AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.