Factsheet for HORVU1Hr1G089700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, vacuole
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G041100.1	Wheat	cytosol	80.33	80.11
TraesCS1A01G032000.1	Wheat	cytosol	80.33	80.11
TraesCS1D01G033700.1	Wheat	cytosol	79.78	79.56
TraesCS1B01G040400.1	Wheat	cytosol	51.09	79.24
Os04t0176200-00	Rice	cytosol	38.52	60.0
Os04t0104900-01	Rice	cytosol	57.92	59.89
Os04t0175900-01	Rice	cytosol, plasma membrane	58.47	57.68
Os04t0175600-01	Rice	plasma membrane	59.29	57.41
HORVU7Hr1G088940.1	Barley	cytosol	28.96	46.9
GSMUA_Achr2P04480_001	Banana	cytosol	29.23	46.72
HORVU4Hr1G001250.1	Barley	cytosol	45.08	46.09
HORVU7Hr1G082280.1	Barley	cytosol	43.99	44.72
HORVU7Hr1G119480.2	Barley	cytosol	43.17	44.26
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	42.62	43.7
HORVU2Hr1G119660.1	Barley	cytosol	43.17	43.65
HORVU1Hr1G003370.2	Barley	cytosol	42.08	43.5
HORVU1Hr1G011930.1	Barley	cytosol	41.8	43.47
GSMUA_AchrUn_...	Banana	cytosol	42.62	43.21
HORVU3Hr1G049400.1	Barley	cytosol	18.85	42.86
GSMUA_AchrUn_...	Banana	cytosol, vacuole	42.08	42.66
GSMUA_Achr2P04370_001	Banana	cytosol	41.8	42.27
GSMUA_AchrUn_...	Banana	cytosol	31.69	41.88
CDY18304	Canola	cytosol	23.5	41.75
CDY18302	Canola	cytosol	23.5	41.75
GSMUA_AchrUn_...	Banana	cytosol	34.43	41.72
KRH14071	Soybean	cytosol	22.95	40.78
HORVU1Hr1G089620.1	Barley	cytosol	41.53	40.53
Solyc03g080180.2.1	Tomato	extracellular	39.34	40.34
PGSC0003DMT400001512	Potato	cytosol	39.34	39.67
KRH64288	Soybean	cytosol, nucleus	39.34	39.45
HORVU3Hr1G116770.1	Barley	cytosol	42.62	38.71
KRH53640	Soybean	cytosol	38.52	38.63
KRH53638	Soybean	mitochondrion	38.52	38.63
CDY19037	Canola	cytosol	38.8	38.48
KRH64289	Soybean	cytosol	34.97	38.44
KRH53639	Soybean	cytosol	38.25	38.25
Bra019031.1-P	Field mustard	cytosol	37.43	37.33
CDY19039	Canola	cytosol	35.79	37.22
CDY55338	Canola	cytosol	30.05	37.16
Bra026320.1-P	Field mustard	cytosol	30.05	37.16
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	42.62	37.14
CDY29856	Canola	cytosol	36.89	36.78
HORVU6Hr1G092780.2	Barley	cytosol	13.66	36.76
AT5G54160.1	Thale cress	cytosol	36.34	36.64
CDY14330	Canola	cytosol	35.79	36.19
CDX92835	Canola	cytosol	36.07	35.97
Bra003009.1-P	Field mustard	cytosol	34.15	35.71
Bra003007.1-P	Field mustard	cytosol	34.97	35.16
CDY43839	Canola	cytosol	34.97	35.16
CDY18306	Canola	cytosol	34.97	35.16
CDY14328	Canola	cytosol	34.97	35.16
CDY43052	Canola	cytosol	34.7	34.89
Bra029041.1-P	Field mustard	cytosol	34.7	34.89
CDY28789	Canola	cytosol	32.51	32.96
Bra022700.1-P	Field mustard	cytosol	32.51	32.96
CDY41780	Canola	cytosol	20.49	29.3
HORVU6Hr1G092840.2	Barley	cytosol	23.5	29.25
VIT_16s0098g00850.t01	Wine grape	cytosol	39.34	19.46

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	EMBL:AK367574	UniProt:F2DUK6	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008171	GO:GO:0009266	GO:GO:0009628	GO:GO:0009719	GO:GO:0009753	GO:GO:0016206
GO:GO:0016740	GO:GO:0032259	GO:GO:0046983	GO:GO:0102084	GO:GO:0102913	GO:GO:0102938
EnsemblPlantsGene:HORVU1Hr1G089700	EnsemblPlants:HORVU1Hr1G089700.1	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2
PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120
InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI0002007289	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DUK6]

Coordinates

chrchr1H:-:544633161..544644353

Molecular Weight (calculated)

39528.3 Da

IEP (calculated)

5.074

GRAVY (calculated)

0.075

Length

366 amino acids

Sequence
(BLAST)

001: MENTTLSGSR SNLAGDEEEE TWLHAWGLIT SFAVSMTLKA AIELGLFDAL SNAGGRALTA DELAAGLPAV DKTDGVASVD RILRLLASFD VVRCLTETGA
101: HGETIRQYTP APVCRWLAIN HGGSSLAPYA MFTTDQDCLT AWQQLGAAVE GGQTAFGRTH GVTMVEHFGR TPRLSGVFDK AMVQISAMVT SKLLERFHGF
201: DDISVLVDVG GGTGATLKMV TSTYKHIRGI NFDLPYAISL APSIPGVEHI AGNMFDYVPS GDAVLLKTVL HILDDNDCIR LLKNCHGALS DKGRLIAVEF
301: VLPGTPEVTR AAQNLFILDV MMLNNSEGGK ERTEEEFLKL ARQSGFSGTF QSTYIFGNFW ALEFTK

Best Arabidopsis Sequence Match ( AT1G21110.1 )
(BLAST)

001: MGYLFEETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKASLELGV FDTLYAEASR TDSFLSPSEI ASKLPTTPRN PGAPVLLDRM LRLLASYSMV
101: KCEKVSVGKE QRVYRAEPIC RFFLKNNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYQGFKGV NVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPT YPGVEHVAGD MFVDVPTGNA MILKRILHDW TDEDCVKILK NCWKSLPQNG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFSHCQFV CQAYHCWIIE FCK

Arabidopsis Description

IGMT3Indole glucosinolate O-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.