Factsheet for Os04t0175600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0176200-00	Rice	cytosol	52.65	84.68
Os04t0104900-01	Rice	cytosol	68.78	73.45
Os04t0175900-01	Rice	cytosol, plasma membrane	71.16	72.51
Os12t0202700-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	37.04	63.35
TraesCS3B01G448600.1	Wheat	cytosol	61.11	62.43
TraesCS1D01G033700.1	Wheat	cytosol	58.47	60.22
TraesCS1A01G032000.1	Wheat	cytosol	58.2	59.95
HORVU1Hr1G089700.1	Barley	cytosol, vacuole	57.41	59.29
TraesCS1B01G041100.1	Wheat	cytosol	57.14	58.86
TraesCS1B01G040400.1	Wheat	cytosol	35.71	57.2
Os12t0240900-01	Rice	cytosol	53.44	53.87
Os12t0199500-00	Rice	cytosol	29.1	52.63
GSMUA_Achr2P04480_001	Banana	cytosol	30.69	50.66
CDY18302	Canola	cytosol	26.98	49.51
CDY18304	Canola	cytosol	26.98	49.51
Os08t0157500-01	Rice	cytosol, plasma membrane	46.56	47.83
KRH14071	Soybean	cytosol	25.66	47.09
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	43.39	45.94
GSMUA_AchrUn_...	Banana	cytosol	36.51	45.7
GSMUA_AchrUn_...	Banana	cytosol, vacuole	43.39	45.43
GSMUA_AchrUn_...	Banana	cytosol	43.39	45.43
Solyc03g080180.2.1	Tomato	extracellular	42.86	45.38
PGSC0003DMT400001512	Potato	cytosol	43.39	45.18
GSMUA_AchrUn_...	Banana	cytosol	32.8	44.77
GSMUA_Achr2P04370_001	Banana	cytosol	42.86	44.75
KRH64288	Soybean	cytosol, nucleus	42.86	44.38
KRH53640	Soybean	cytosol	42.59	44.11
KRH53639	Soybean	cytosol	42.33	43.72
KRH53638	Soybean	mitochondrion	41.8	43.29
KRH64289	Soybean	cytosol	37.83	42.94
CDY14330	Canola	cytosol	41.01	42.82
Bra003009.1-P	Field mustard	cytosol	39.15	42.29
AT5G54160.1	Thale cress	cytosol	40.48	42.15
CDY43839	Canola	cytosol	40.21	41.76
CDY18306	Canola	cytosol	40.21	41.76
CDY43052	Canola	cytosol	39.95	41.48
Bra029041.1-P	Field mustard	cytosol	39.95	41.48
CDY19037	Canola	cytosol	40.48	41.46
Bra003007.1-P	Field mustard	cytosol	39.68	41.21
CDY14328	Canola	cytosol	39.68	41.21
CDY55338	Canola	cytosol	32.01	40.88
Bra026320.1-P	Field mustard	cytosol	32.01	40.88
CDY19039	Canola	cytosol	37.83	40.62
Bra019031.1-P	Field mustard	cytosol	39.42	40.6
CDY29856	Canola	cytosol	39.15	40.33
Os02t0823400-01	Rice	cytosol	38.62	40.0
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	44.44	40.0
CDX92835	Canola	cytosol	38.36	39.51
CDY28789	Canola	cytosol	35.98	37.67
Bra022700.1-P	Field mustard	cytosol	35.98	37.67
CDY41780	Canola	cytosol	23.02	33.98
VIT_16s0098g00850.t01	Wine grape	cytosol	44.18	22.57

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	EntrezGene:4335077	MapMan:50.2.1	EMBL:AK072016	ProteinID:BAF14075.1
ProteinID:BAS87934.1	ProteinID:CAD39487.2	ProteinID:EEE60600.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019438	GO:GO:0032259	GO:GO:0046983
InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	EnsemblPlantsGene:Os04g0175600	EnsemblPlants:Os04t0175600-01
PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120
InterPro:Plant_MeTrfase_dimerisation	UniProt:Q7XXD3	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI000021C947
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015633945.1	SEG:seg	:	:

Description

CAFFEIC ACID 3-O-METHYLTRANSFERASE LIKE 5Similar to 0-methyltransferase (EC 2.1.1.6) (Fragment). (Os04t0175600-01)

Coordinates

chr4:+:5161947..5167404

Molecular Weight (calculated)

40596.9 Da

IEP (calculated)

5.236

GRAVY (calculated)

0.025

Length

378 amino acids

Sequence
(BLAST)

001: MDPYTSRAPA SGGVAAGDDD EEAACLQAFE LMCIFTVPMT LKAAIELGLL DALAAAGDGR ALTADELAAA RLPDAAPDKA EAASSVDRML RLLASFDVVK
101: CSTEAGPGGE PPRRRYSPAP VCRLFTAGGN SHRGSLAPSV LFGVDEDYLC TWRQLAAAVG GGGPSAFERA HGMRMFEYMG TNRRLNTLFN QAMAQQSMIV
201: IDKLLDRFHG FDGVGVLVDV GGGTGATLEM ITSRYKHITG VNFDLPHVIS QAPSIPGVKH IAGNMFESIS NIGDAIFLKM ILHMQNDEDC IKILKNCHQA
301: LPDNGKVIAV EIVLPTIPDL AQTARYPFQM DMIMLSNSRG GKERTELEFA KLATDSGFSG ALRTTYILAN YWVLEFSK

Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)

001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK

Arabidopsis Description

IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.