Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G54160.1 | Os10t0114400-01 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0199500-00 | Rice | cytosol | 63.35 | 66.99 |
| Os04t0175600-01 | Rice | plasma membrane | 63.35 | 37.04 |
| Os04t0175900-01 | Rice | cytosol, plasma membrane | 61.54 | 36.66 |
| Os04t0104900-01 | Rice | cytosol | 56.56 | 35.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.27 | 32.13 |
| Os04t0176200-00 | Rice | cytosol | 33.48 | 31.49 |
| Os12t0240900-01 | Rice | cytosol | 49.32 | 29.07 |
| CDY55338 | Canola | cytosol | 38.01 | 28.38 |
| Bra026320.1-P | Field mustard | cytosol | 38.01 | 28.38 |
| CDY41780 | Canola | cytosol | 32.58 | 28.12 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.29 | 25.83 |
| Os08t0157500-01 | Rice | cytosol, plasma membrane | 42.99 | 25.82 |
| Solyc03g080180.2.1 | Tomato | extracellular | 39.37 | 24.37 |
| GSMUA_Achr2P04370_001 | Banana | cytosol | 39.82 | 24.31 |
| CDY43839 | Canola | cytosol | 39.82 | 24.18 |
| PGSC0003DMT400001512 | Potato | cytosol | 39.37 | 23.97 |
| Bra029041.1-P | Field mustard | cytosol | 39.37 | 23.9 |
| CDY43052 | Canola | cytosol | 39.37 | 23.9 |
| GSMUA_Achr9P28010_001 | Banana | cytosol, plasma membrane, vacuole | 38.46 | 23.81 |
| Bra003009.1-P | Field mustard | cytosol | 37.56 | 23.71 |
| CDX92835 | Canola | cytosol | 39.37 | 23.71 |
| Bra019031.1-P | Field mustard | cytosol | 39.37 | 23.71 |
| CDY29856 | Canola | cytosol | 38.91 | 23.43 |
| Bra003007.1-P | Field mustard | cytosol | 38.46 | 23.35 |
| CDY14328 | Canola | cytosol | 38.46 | 23.35 |
| CDY19037 | Canola | cytosol | 38.91 | 23.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.01 | 23.27 |
| GSMUA_Achr2P04480_001 | Banana | cytosol | 23.98 | 23.14 |
| AT5G54160.1 | Thale cress | cytosol | 38.01 | 23.14 |
| CDY18306 | Canola | cytosol | 38.01 | 23.08 |
| CDY19039 | Canola | cytosol | 36.65 | 23.01 |
| GSMUA_AchrUn_... | Banana | cytosol, vacuole | 37.56 | 22.99 |
| CDY14330 | Canola | cytosol | 37.56 | 22.93 |
| KRH53640 | Soybean | cytosol | 37.56 | 22.74 |
| KRH64288 | Soybean | cytosol, nucleus | 37.56 | 22.74 |
| KRH53639 | Soybean | cytosol | 37.56 | 22.68 |
| KRH53638 | Soybean | mitochondrion | 36.2 | 21.92 |
| GSMUA_Achr2P04400_001 | Banana | cytosol, golgi, mitochondrion | 40.72 | 21.43 |
| CDY18304 | Canola | cytosol | 19.91 | 21.36 |
| CDY18302 | Canola | cytosol | 19.91 | 21.36 |
| CDY28789 | Canola | cytosol | 33.48 | 20.5 |
| Bra022700.1-P | Field mustard | cytosol | 33.48 | 20.5 |
| KRH64289 | Soybean | cytosol | 30.32 | 20.12 |
| Os02t0823400-01 | Rice | cytosol | 31.22 | 18.9 |
| KRH14071 | Soybean | cytosol | 14.48 | 15.53 |
| VIT_16s0098g00850.t01 | Wine grape | cytosol | 41.18 | 12.3 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | UniProt:A0A0P0Y7X4 | ProteinID:BAT16268.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0008171 | GO:GO:0016740 | GO:GO:0032259 | GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 |
| InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | EnsemblPlantsGene:Os12g0202700 | EnsemblPlants:Os12t0202700-00 | PFAM:PF00891 | PFAM:PF08100 |
| PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF120 | InterPro:Plant_MeTrfase_dimerisation | InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 |
| SUPFAM:SSF53335 | SignalP:SignalP-noTM | UniParc:UPI000393C0D0 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
Similar to N-methyltransferase. (Os12t0202700-00)
Coordinates
chr12:+:5364515..5365774
Molecular Weight (calculated)
24028.0 Da
IEP (calculated)
6.391
GRAVY (calculated)
0.080
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: NRSMVLRAAV QLGLLDALSA AAGNALTADE LAEKIQATDK AEVAVSVDRI LRYLASFDVV RCSTETSPDG ALLRRYMPAP VCRWLTRNNG EGSLAPFTVF
101: VVDEDHLLPW QHIAAAVTSG GPAPFERAHG LLYFEYMGKN QRLGALFDHA MAQHSVILVS KMLERFQGFD GVQQLVDVGG GDGSTLGMIT SRYKHIRGIN
201: YDLPHVISQA PSLPGMCEIF V
101: VVDEDHLLPW QHIAAAVTSG GPAPFERAHG LLYFEYMGKN QRLGALFDHA MAQHSVILVS KMLERFQGFD GVQQLVDVGG GDGSTLGMIT SRYKHIRGIN
201: YDLPHVISQA PSLPGMCEIF V
001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKVNFFKSFL KS
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKVNFFKSFL KS
Arabidopsis Description
At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.