Factsheet for GSMUA_Achr2P04400_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 3
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P04370_001	Banana	cytosol	79.76	92.54
GSMUA_Achr2P04480_001	Banana	cytosol	41.9	76.86
GSMUA_AchrUn_...	Banana	cytosol	42.62	64.62
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	54.52	64.15
GSMUA_AchrUn_...	Banana	cytosol	45.71	63.58
GSMUA_Achr1P06370_001	Banana	cytosol	54.52	62.74
GSMUA_AchrUn_...	Banana	cytosol	53.57	61.98
GSMUA_Achr9P23460_001	Banana	cytosol	49.29	61.98
GSMUA_Achr3P27470_001	Banana	cytosol	53.1	61.6
GSMUA_Achr2P04860_001	Banana	cytosol	52.86	60.99
GSMUA_AchrUn_...	Banana	cytosol	52.38	60.94
GSMUA_AchrUn_...	Banana	cytosol	52.38	60.77
GSMUA_Achr2P04420_001	Banana	cytosol	52.38	60.61
GSMUA_Achr2P04390_001	Banana	cytosol	52.14	60.5
GSMUA_AchrUn_...	Banana	cytosol, vacuole	51.9	60.39
GSMUA_Achr10P...	Banana	cytosol	51.9	60.22
GSMUA_Achr2P04380_001	Banana	cytosol	51.9	59.89
GSMUA_Achr4P24480_001	Banana	cytosol	51.19	59.56
GSMUA_Achr2P04360_001	Banana	cytosol	50.48	58.4
GSMUA_Achr9P23470_001	Banana	cytosol	46.19	58.08
GSMUA_Achr2P04470_001	Banana	cytosol	49.29	57.18
GSMUA_Achr2P04410_001	Banana	cytosol	48.57	56.35
GSMUA_Achr2P04820_001	Banana	cytosol	43.33	55.49
GSMUA_Achr2P04840_001	Banana	cytosol	38.81	53.97
CDY18302	Canola	cytosol	26.19	53.4
CDY18304	Canola	cytosol	26.19	53.4
KRH53638	Soybean	mitochondrion	45.95	52.88
KRH53639	Soybean	cytosol	45.95	52.73
Solyc03g080180.2.1	Tomato	extracellular	44.52	52.38
KRH64288	Soybean	cytosol, nucleus	45.48	52.33
KRH53640	Soybean	cytosol	45.48	52.33
GSMUA_Achr9P23490_001	Banana	cytosol	26.9	52.07
PGSC0003DMT400001512	Potato	cytosol	45.0	52.07
CDY29856	Canola	cytosol	44.76	51.23
Os04t0176200-00	Rice	cytosol	28.57	51.06
Bra019031.1-P	Field mustard	cytosol	44.52	50.95
AT5G54160.1	Thale cress	cytosol	43.81	50.69
KRH64289	Soybean	cytosol	39.76	50.15
CDX92835	Canola	cytosol	43.81	50.14
CDY43839	Canola	cytosol	42.86	49.45
CDY18306	Canola	cytosol	42.86	49.45
CDY14330	Canola	cytosol	42.62	49.45
Os12t0240900-01	Rice	cytosol	44.05	49.33
CDY43052	Canola	cytosol	42.62	49.18
CDY14328	Canola	cytosol	42.62	49.18
Bra029041.1-P	Field mustard	cytosol	42.62	49.18
Bra003007.1-P	Field mustard	cytosol	42.62	49.18
Bra003009.1-P	Field mustard	cytosol	40.71	48.86
GSMUA_Achr9P18820_001	Banana	mitochondrion	40.48	48.71
CDY19037	Canola	cytosol	41.9	47.7
Bra026320.1-P	Field mustard	cytosol	33.33	47.3
CDY55338	Canola	cytosol	33.33	47.3
Os04t0104900-01	Rice	cytosol	39.29	46.61
Zm00001d048087_P001	Maize	cytosol	40.0	46.03
CDY19039	Canola	cytosol	38.57	46.02
OQU93005	Sorghum	cytosol	39.76	45.88
Bra022700.1-P	Field mustard	cytosol	38.81	45.15
CDY28789	Canola	cytosol	38.81	45.15
Os04t0175900-01	Rice	cytosol, plasma membrane	39.29	44.47
Os04t0175600-01	Rice	plasma membrane	40.0	44.44
TraesCS3B01G448600.1	Wheat	cytosol	39.05	44.32
GSMUA_Achr11P...	Banana	cytosol	15.48	44.22
TraesCS1B01G040400.1	Wheat	cytosol	24.76	44.07
KRH14071	Soybean	cytosol	21.43	43.69
HORVU1Hr1G089700.1	Barley	cytosol, vacuole	37.14	42.62
OQU79974	Sorghum	cytosol	36.9	42.01
CDY41780	Canola	cytosol	25.48	41.8
KXG24559	Sorghum	cytosol	37.14	41.38
KXG24554	Sorghum	cytosol	36.9	41.22
EES13432	Sorghum	cytosol, plastid, vacuole	36.67	41.18
TraesCS1D01G033700.1	Wheat	cytosol	35.95	41.14
TraesCS1A01G032000.1	Wheat	cytosol	35.71	40.87
TraesCS1B01G041100.1	Wheat	cytosol	35.71	40.87
Os12t0202700-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	21.43	40.72
Os12t0199500-00	Rice	cytosol	15.71	31.58
VIT_16s0098g00850.t01	Wine grape	cytosol	46.67	26.49

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0032259	GO:GO:0046983	EnsemblPlantsGene:GSMUA_Achr2G04400_001	EnsemblPlants:GSMUA_Achr2P04400_001	EnsemblPlants:GSMUA_Achr2T04400_001	InterPro:IPR016461
InterPro:IPR036388	UniProt:M0S531	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785
SUPFAM:SSF53335	UniParc:UPI000295CE8C	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:

Description

Caffeic acid 3-O-methyltransferase [Source:GMGC_GENE;Acc:GSMUA_Achr2G04400_001]

Coordinates

chr2:-:9825864..9832488

Molecular Weight (calculated)

46278.5 Da

IEP (calculated)

6.371

GRAVY (calculated)

0.089

Length

420 amino acids

Sequence
(BLAST)

001: MHLSRASTKS IALPKSSWPT DELLQLCIKS HPFLFPRSTL KYYTLPLLLF FVSQLIGNMP ATNDVLQLTA EEEQEACARA LQLSCGAVLP MVLKVAIELG
101: LLQIIVKAGP ATPLSSEEIA AQLPSENPEA AAAWVDRILR LLASNKIVSC IVEAGADDRR SRKYRMAPIC KYLTENEDGS LANLLLMHHD KVFLDLWHYL
201: KGSVLDGGLP VMAAYGMSSF DYQGTDPRFN KIFNEAMRGH TAVNVNQLLR TYGGFDDVKV LVDVGGGVGA TLGMITSRHT HIKGINLDLP HVISGAQPLP
301: GVQHVIGDMF EAVPSGDAIF LKWILHDWTD EHCAKLLKNC WKALPEKGKV IVMECILPVV PEATPRDQYI YQLDICMSTY NIGGKERTEQ EFQALAMDAG
401: FSGFKALPMF AGTCIMEFTK

Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)

001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK

Arabidopsis Description

IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.