CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79974	Sorghum	cytosol	64.99	66.4
KXG24554	Sorghum	cytosol	65.25	65.43
EES13432	Sorghum	cytosol, plastid, vacuole	61.01	61.5
OQU93005	Sorghum	cytosol	55.17	57.14
Os12t0240900-01	Rice	cytosol	55.7	56.0
GSMUA_Achr2P04480_001	Banana	cytosol	31.03	51.09
EES14578	Sorghum	cytosol	45.89	47.79
CDY18304	Canola	cytosol	25.73	47.09
CDY18302	Canola	cytosol	25.73	47.09
GSMUA_AchrUn_...	Banana	cytosol, vacuole	43.5	45.43
GSMUA_AchrUn_...	Banana	cytosol	43.24	45.15
GSMUA_AchrUn_...	Banana	cytosol	36.07	45.03
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	41.64	43.98
GSMUA_Achr2P04370_001	Banana	cytosol	41.38	43.09
GSMUA_AchrUn_...	Banana	cytosol	31.03	42.24
Solyc03g080180.2.1	Tomato	extracellular	39.79	42.02
PGSC0003DMT400001512	Potato	cytosol	40.05	41.6
Bra003009.1-P	Field mustard	cytosol	38.46	41.43
CDY14330	Canola	cytosol	39.52	41.16
KRH64288	Soybean	cytosol, nucleus	38.73	40.0
AT5G54160.1	Thale cress	cytosol	38.46	39.94
Bra003007.1-P	Field mustard	cytosol	38.46	39.84
CDY14328	Canola	cytosol	38.46	39.84
CDY18306	Canola	cytosol	38.46	39.84
KRH14071	Soybean	cytosol	21.75	39.81
KRH53639	Soybean	cytosol	38.46	39.62
KRH53640	Soybean	cytosol	38.2	39.45
KRH64289	Soybean	cytosol	34.75	39.34
KRH53638	Soybean	mitochondrion	37.93	39.18
CDY43839	Canola	cytosol	37.67	39.01
CDY19037	Canola	cytosol	37.93	38.75
CDY43052	Canola	cytosol	37.4	38.74
Bra029041.1-P	Field mustard	cytosol	37.4	38.74
Bra019031.1-P	Field mustard	cytosol	37.67	38.69
CDY19039	Canola	cytosol	36.07	38.64
CDY29856	Canola	cytosol	37.4	38.42
CDY55338	Canola	cytosol	29.97	38.18
Bra026320.1-P	Field mustard	cytosol	29.97	38.18
CDX92835	Canola	cytosol	36.87	37.87
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	41.38	37.14
CDY28789	Canola	cytosol	34.75	36.29
Bra022700.1-P	Field mustard	cytosol	34.75	36.29
CDY41780	Canola	cytosol	22.81	33.59
EES06050	Sorghum	cytosol, plastid	31.83	31.83
VIT_16s0098g00850.t01	Wine grape	cytosol	41.64	21.22

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	UniProt:A0A1B6PFV1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171
GO:GO:0016740	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	EnsemblPlants:KXG24559
ProteinID:KXG24559	ProteinID:KXG24559.1	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100
PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases
EnsemblPlantsGene:SORBI_3007G059100	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI00081AC681	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:6171780..6176126

Molecular Weight (calculated)

41495.0 Da

IEP (calculated)

4.926

GRAVY (calculated)

0.052

Length

377 amino acids

Sequence
(BLAST)

001: MGSYDSSSSS SNDSSARNEE DESCMFALKL LGGFAVPFTI KAVIELGVMD QLLTAERAMS AEELVAAAVA AQLPRPEVAC TMVDRLLRFL ASHSVVRCTT
101: EVVVGTDDAT TTTCCRRSYA ASPVCKWFAR NGVEDSVLPL GMMILNKTFL DSWQNITDAV LEGAAPFEKT YGMPMFEYLS TNGPLNTVFH EAMANHSMII
201: TKKLLKFFRG FEGLDVLVDV GGGNGTTLQM IRGQYKNMRG INYDLPHVIA QAAPVEGVEH VGGSMFDNIP RGNAVLLKWI LHDWDDKACI KILKNCYTAL
301: HVRGKVIVLE YVVPDEPEPT LAAQGAFELD LTMLVTFGSG KERTQREFSE LAMEAGFSRE FKATYIFANV WALEFTK

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.