Factsheet for GSMUA_Achr2P04480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18304	Canola	cytosol	48.91	54.37
CDY18302	Canola	cytosol	48.91	54.37
Os04t0176200-00	Rice	cytosol	51.09	49.79
GSMUA_Achr9P23460_001	Banana	cytosol	69.0	47.31
GSMUA_Achr2P04370_001	Banana	cytosol	73.8	46.69
GSMUA_Achr11P...	Banana	cytosol	29.26	45.58
GSMUA_AchrUn_...	Banana	cytosol	58.95	44.7
KRH14071	Soybean	cytosol	40.17	44.66
GSMUA_Achr9P23470_001	Banana	cytosol	63.32	43.41
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	67.25	43.14
TraesCS1B01G040400.1	Wheat	cytosol	43.67	42.37
GSMUA_Achr3P27470_001	Banana	cytosol	66.81	42.27
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	76.86	41.9
GSMUA_AchrUn_...	Banana	cytosol	65.07	41.27
GSMUA_AchrUn_...	Banana	cytosol, vacuole	64.63	41.0
GSMUA_AchrUn_...	Banana	cytosol	64.63	40.77
GSMUA_Achr1P06370_001	Banana	cytosol	63.76	40.0
GSMUA_Achr9P18820_001	Banana	mitochondrion	60.26	39.54
GSMUA_Achr4P24480_001	Banana	cytosol	61.57	39.06
GSMUA_Achr10P...	Banana	cytosol	61.57	38.95
GSMUA_Achr2P04360_001	Banana	cytosol	61.14	38.57
GSMUA_Achr2P04420_001	Banana	cytosol	61.14	38.57
GSMUA_Achr2P04380_001	Banana	cytosol	60.7	38.19
GSMUA_Achr2P04860_001	Banana	cytosol	60.26	37.91
GSMUA_Achr2P04390_001	Banana	cytosol	59.83	37.85
GSMUA_AchrUn_...	Banana	cytosol	59.83	37.85
GSMUA_Achr2P04410_001	Banana	cytosol	57.64	36.46
GSMUA_Achr2P04470_001	Banana	cytosol	57.64	36.46
GSMUA_Achr2P04820_001	Banana	cytosol	50.22	35.06
KRH53640	Soybean	cytosol	55.46	34.79
KRH64288	Soybean	cytosol, nucleus	55.46	34.79
Solyc03g080180.2.1	Tomato	extracellular	54.15	34.73
KRH53638	Soybean	mitochondrion	55.02	34.52
PGSC0003DMT400001512	Potato	cytosol	54.59	34.44
KRH53639	Soybean	cytosol	55.02	34.43
KRH64289	Soybean	cytosol	49.78	34.23
AT5G54160.1	Thale cress	cytosol	54.15	34.16
CDY43839	Canola	cytosol	54.15	34.07
CDY14330	Canola	cytosol	53.71	33.98
Bra003007.1-P	Field mustard	cytosol	53.71	33.79
CDY43052	Canola	cytosol	53.71	33.79
Bra029041.1-P	Field mustard	cytosol	53.71	33.79
CDY18306	Canola	cytosol	53.71	33.79
CDY14328	Canola	cytosol	53.71	33.79
GSMUA_Achr2P04840_001	Banana	cytosol	44.54	33.77
CDY29856	Canola	cytosol	53.28	33.24
Zm00001d048087_P001	Maize	cytosol	52.84	33.15
Os04t0104900-01	Rice	cytosol	51.09	33.05
Bra019031.1-P	Field mustard	cytosol	52.84	32.97
Bra003009.1-P	Field mustard	cytosol	50.22	32.86
CDX92835	Canola	cytosol	52.4	32.7
Os12t0240900-01	Rice	cytosol	53.28	32.53
OQU93005	Sorghum	cytosol	51.53	32.42
CDY19037	Canola	cytosol	51.97	32.25
OQU79974	Sorghum	cytosol	51.53	31.98
KXG24554	Sorghum	cytosol	52.4	31.91
TraesCS3B01G448600.1	Wheat	cytosol	51.53	31.89
CDY19039	Canola	cytosol	48.91	31.82
CDY28789	Canola	cytosol	49.34	31.3
Bra022700.1-P	Field mustard	cytosol	49.34	31.3
GSMUA_AchrUn_...	Banana	cytosol	37.55	31.05
KXG24559	Sorghum	cytosol	51.09	31.03
EES13432	Sorghum	cytosol, plastid, vacuole	50.22	30.75
Os04t0175900-01	Rice	cytosol, plasma membrane	49.78	30.73
Os04t0175600-01	Rice	plasma membrane	50.66	30.69
HORVU1Hr1G089700.1	Barley	cytosol, vacuole	46.72	29.23
TraesCS1D01G033700.1	Wheat	cytosol	46.29	28.88
TraesCS1A01G032000.1	Wheat	cytosol	45.85	28.61
TraesCS1B01G041100.1	Wheat	cytosol	45.41	28.34
CDY55338	Canola	cytosol	35.81	27.7
Bra026320.1-P	Field mustard	cytosol	35.81	27.7
Os12t0202700-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	23.14	23.98
CDY41780	Canola	cytosol	24.45	21.88
GSMUA_Achr9P23490_001	Banana	cytosol	18.78	19.82
VIT_16s0098g00850.t01	Wine grape	cytosol	55.46	17.16
Os12t0199500-00	Rice	cytosol	12.23	13.4

Protein Annotations

Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	EnsemblPlantsGene:GSMUA_Achr2G04480_001	EnsemblPlants:GSMUA_Achr2P04480_001
EnsemblPlants:GSMUA_Achr2T04480_001	InterPro:IPR016461	UniProt:M0S539	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000294BA4E
SEG:seg	:	:	:	:	:

Description

Caffeic acid 3-O-methyltransferase [Source:GMGC_GENE;Acc:GSMUA_Achr2G04480_001]

Coordinates

chr2:-:9883232..9884099

Molecular Weight (calculated)

25488.8 Da

IEP (calculated)

6.305

GRAVY (calculated)

-0.124

Length

229 amino acids

Sequence
(BLAST)

001: MRWVTRHHVK DSVLDGSEPV MAAYGMSSFE YQGTDPRFNK VFNEAMQSHS TIMISRLLRT YGGFDDVEVL VDVGGGVGTT LGMITAKHPR IKGINFDLSH
101: VISEAQPLPG VQHVSGDMFE AVPRGDAIFL KLILHDWSDE NCVKLLKNCW KALPEKGKVI VVECVLPAVP KPTPRDQGIF QLDLCMATYN IGGKERTEEE
201: FQGLARDGGF TGFKALHLFA DTWVMEFTK

Best Arabidopsis Sequence Match ( AT1G33030.1 )
(BLAST)

001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK

Arabidopsis Description

At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.