CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
plastid 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048087_P001	Maize	cytosol	89.01	88.77
Os12t0240900-01	Rice	cytosol	69.23	67.2
KXG24559	Sorghum	cytosol	57.14	55.17
OQU79974	Sorghum	cytosol	55.77	55.01
EES13432	Sorghum	cytosol, plastid, vacuole	56.32	54.81
KXG24554	Sorghum	cytosol	56.04	54.26
GSMUA_Achr2P04480_001	Banana	cytosol	32.42	51.53
EES14578	Sorghum	cytosol	49.73	50.0
GSMUA_AchrUn_...	Banana	cytosol	39.56	47.68
CDY18302	Canola	cytosol	26.65	47.09
CDY18304	Canola	cytosol	26.65	47.09
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	45.88	46.78
GSMUA_AchrUn_...	Banana	cytosol	46.15	46.54
GSMUA_AchrUn_...	Banana	cytosol, vacuole	45.88	46.26
GSMUA_Achr2P04370_001	Banana	cytosol	44.78	45.03
Solyc03g080180.2.1	Tomato	extracellular	43.41	44.26
PGSC0003DMT400001512	Potato	cytosol	43.68	43.8
GSMUA_AchrUn_...	Banana	cytosol	32.97	43.32
KRH14071	Soybean	cytosol	24.18	42.72
KRH53640	Soybean	cytosol	41.21	41.1
KRH64288	Soybean	cytosol, nucleus	40.93	40.82
KRH53639	Soybean	cytosol	40.93	40.71
CDY14330	Canola	cytosol	40.38	40.61
Bra003009.1-P	Field mustard	cytosol	39.01	40.57
KRH53638	Soybean	mitochondrion	40.66	40.55
Bra026320.1-P	Field mustard	cytosol	32.97	40.54
CDY55338	Canola	cytosol	32.97	40.54
AT5G54160.1	Thale cress	cytosol	40.38	40.5
CDY14328	Canola	cytosol	40.38	40.38
CDY18306	Canola	cytosol	40.38	40.38
Bra003007.1-P	Field mustard	cytosol	40.38	40.38
CDY43839	Canola	cytosol	40.11	40.11
CDY19037	Canola	cytosol	40.38	39.84
CDY43052	Canola	cytosol	39.84	39.84
Bra029041.1-P	Field mustard	cytosol	39.84	39.84
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	45.88	39.76
KRH64289	Soybean	cytosol	36.26	39.64
CDY29856	Canola	cytosol	39.56	39.24
Bra019031.1-P	Field mustard	cytosol	39.56	39.24
CDX92835	Canola	cytosol	39.01	38.69
CDY19039	Canola	cytosol	37.36	38.64
Bra022700.1-P	Field mustard	cytosol	35.16	35.46
CDY28789	Canola	cytosol	35.16	35.46
EES06050	Sorghum	cytosol, plastid	34.62	33.42
CDY41780	Canola	cytosol	22.53	32.03
VIT_16s0098g00850.t01	Wine grape	cytosol	43.68	21.49

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	EntrezGene:8085307	UniProt:A0A1Z5SB60	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461
InterPro:IPR036388	InterPro:O-MeTrfase_COMT	EnsemblPlants:OQU93005	ProteinID:OQU93005	ProteinID:OQU93005.1	InterPro:O_MeTrfase_2
PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120
InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G456650	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI0001A82873
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002465645.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:73295472..73298567

Molecular Weight (calculated)

39604.8 Da

IEP (calculated)

5.621

GRAVY (calculated)

0.033

Length

364 amino acids

Sequence
(BLAST)

001: MACTTAASLQ HDKANDDEAC MYAQELLFSF IVPMTLKAVI ELGLIDYLLA ADGRSVTPEE LAAEWPQSAE AAAAVDRMMR LLASHSVVRC TTEVGPDGKA
101: RRSYAAAPVC KWLATRNAGG QGSLAPMGLM NLNKAFMETW YFMKEAVTEG ATPTEKAYGM PLFEHLGSDE ASNTLFNQAM AGHSEMIIKK LLEVYRGFEG
201: VDVLVDVGGG TGSTLRMVTA QYKHLRGVNY DLPHVIAQAP PVQGVEHVGG SMFEYIPSGN AILLKWILHL WRDDECVKIL KNCHRALPAN GKVIVVEYVL
301: PASPEPTQVA QVSLLLDVAM LNRLRGAKER TEQEFAQLAA EAGFSGGCRA TYVFASAWAL EFTK

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.