CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

cytosol 2
vacuole 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79974	Sorghum	cytosol	81.82	82.93
KXG24554	Sorghum	cytosol	83.16	82.71
KXG24559	Sorghum	cytosol	61.5	61.01
Os12t0240900-01	Rice	cytosol	56.95	56.8
OQU93005	Sorghum	cytosol	54.81	56.32
GSMUA_Achr2P04480_001	Banana	cytosol	30.75	50.22
CDY18304	Canola	cytosol	26.74	48.54
CDY18302	Canola	cytosol	26.74	48.54
EES14578	Sorghum	cytosol	45.99	47.51
GSMUA_AchrUn_...	Banana	cytosol	37.17	46.03
GSMUA_AchrUn_...	Banana	cytosol	42.78	44.32
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	41.44	43.42
GSMUA_AchrUn_...	Banana	cytosol, vacuole	41.71	43.21
Solyc03g080180.2.1	Tomato	extracellular	40.11	42.02
PGSC0003DMT400001512	Potato	cytosol	39.84	41.05
CDY14330	Canola	cytosol	39.57	40.88
GSMUA_AchrUn_...	Banana	cytosol	30.21	40.79
GSMUA_Achr2P04370_001	Banana	cytosol	39.3	40.61
Bra003009.1-P	Field mustard	cytosol	37.7	40.29
AT5G54160.1	Thale cress	cytosol	38.77	39.94
Bra026320.1-P	Field mustard	cytosol	31.55	39.86
CDY55338	Canola	cytosol	31.55	39.86
Bra003007.1-P	Field mustard	cytosol	38.77	39.84
CDY14328	Canola	cytosol	38.77	39.84
CDY18306	Canola	cytosol	38.77	39.84
KRH14071	Soybean	cytosol	21.93	39.81
KRH64288	Soybean	cytosol, nucleus	38.5	39.45
CDY19037	Canola	cytosol	38.77	39.3
CDY43839	Canola	cytosol	38.24	39.29
KRH53640	Soybean	cytosol	38.24	39.18
CDY43052	Canola	cytosol	37.97	39.01
Bra029041.1-P	Field mustard	cytosol	37.97	39.01
KRH53638	Soybean	mitochondrion	37.97	38.9
KRH64289	Soybean	cytosol	34.22	38.44
KRH53639	Soybean	cytosol	37.43	38.25
Bra019031.1-P	Field mustard	cytosol	37.43	38.15
CDY29856	Canola	cytosol	37.17	37.87
CDY19039	Canola	cytosol	35.29	37.5
CDX92835	Canola	cytosol	36.1	36.78
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	41.18	36.67
CDY28789	Canola	cytosol	33.69	34.9
Bra022700.1-P	Field mustard	cytosol	33.69	34.9
EES06050	Sorghum	cytosol, plastid	32.09	31.83
CDY41780	Canola	cytosol	20.32	29.69
VIT_16s0098g00850.t01	Wine grape	cytosol	40.64	20.54

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	EntrezGene:8080891	UniProt:C5YHU7	EnsemblPlants:EES13432
ProteinID:EES13432	ProteinID:EES13432.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0019438	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461
InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3007G058800
SUPFAM:SSF46785	SUPFAM:SSF53335	unigene:Sbi.11654	TMHMM:TMhelix	UniParc:UPI0001A874CB	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	RefSeq:XP_002443937.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:6103097..6107178

Molecular Weight (calculated)

41066.5 Da

IEP (calculated)

4.788

GRAVY (calculated)

0.007

Length

374 amino acids

Sequence
(BLAST)

001: MGSYTTRVHA VEKAANNQDD ETCMHALMLL GGLAVPCTIK AVIELGIMDL LLAADRAMTA EELTARLPCP AAATAAAMVD RMLRFLASHG VVRCAAATKE
101: SSELGSDGGK SCRRYAAAPV CRWFTRSGGV ESVVPMGLWM TGKTVLETWY NIKEAVLEGE TPFDRAYGQP FFEYLGENGT VNTLFDEAMA NHSTIITKRL
201: VEVFRGFENY SVLVDVGGNK GTTLQMIRSQ YENISGINYD LPRVIAQAPP IEGVEHVGGN MFDNVPRGDA IILKWILHDW GDKDCVKILK NCYAALPVNG
301: TMIILEYILP ETPEETLTSQ LAFNFDFGMM LMYGAKGKER TEKELSELAR EAGFSGDCTA TYIFASIWAL EFTK

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.