Factsheet for GSMUA_Achr4P24480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P04820_001	Banana	cytosol	63.71	70.12
GSMUA_Achr9P23460_001	Banana	cytosol	64.27	69.46
GSMUA_Achr3P27470_001	Banana	cytosol	68.14	67.96
GSMUA_Achr2P04360_001	Banana	cytosol	67.87	67.49
GSMUA_Achr1P06370_001	Banana	cytosol	68.14	67.4
GSMUA_Achr2P04380_001	Banana	cytosol	67.87	67.31
GSMUA_Achr2P04390_001	Banana	cytosol	67.31	67.13
GSMUA_Achr2P04420_001	Banana	cytosol	66.76	66.39
GSMUA_Achr2P04860_001	Banana	cytosol	66.48	65.93
GSMUA_Achr9P23470_001	Banana	cytosol	60.94	65.87
GSMUA_AchrUn_...	Banana	cytosol	64.82	64.46
GSMUA_Achr9P23490_001	Banana	cytosol	38.5	64.06
GSMUA_Achr2P04410_001	Banana	cytosol	63.99	63.81
GSMUA_Achr2P04470_001	Banana	cytosol	63.99	63.81
GSMUA_AchrUn_...	Banana	cytosol	63.16	62.98
GSMUA_Achr2P04840_001	Banana	cytosol	51.8	61.92
GSMUA_Achr2P04480_001	Banana	cytosol	39.06	61.57
GSMUA_Achr10P...	Banana	cytosol	61.5	61.33
GSMUA_AchrUn_...	Banana	cytosol, vacuole	59.56	59.56
KRH53640	Soybean	cytosol	59.83	59.18
KRH53638	Soybean	mitochondrion	59.83	59.18
KRH64288	Soybean	cytosol, nucleus	59.56	58.9
GSMUA_AchrUn_...	Banana	cytosol	45.15	58.84
KRH53639	Soybean	cytosol	59.56	58.74
GSMUA_AchrUn_...	Banana	cytosol	49.03	58.61
GSMUA_Achr2P04370_001	Banana	cytosol	58.73	58.56
GSMUA_AchrUn_...	Banana	cytosol	58.45	58.45
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	56.23	56.86
Solyc03g080180.2.1	Tomato	extracellular	55.96	56.58
CDY18304	Canola	cytosol	32.13	56.31
CDY18302	Canola	cytosol	32.13	56.31
KRH64289	Soybean	cytosol	51.52	55.86
PGSC0003DMT400001512	Potato	cytosol	55.96	55.65
AT5G54160.1	Thale cress	cytosol	54.85	54.55
CDY18306	Canola	cytosol	54.29	53.85
CDY55338	Canola	cytosol	44.04	53.72
Bra026320.1-P	Field mustard	cytosol	44.04	53.72
Bra019031.1-P	Field mustard	cytosol	54.57	53.68
CDY14330	Canola	cytosol	53.74	53.59
CDY29856	Canola	cytosol	54.29	53.41
CDY43839	Canola	cytosol	53.74	53.3
CDY14328	Canola	cytosol	53.46	53.02
Bra029041.1-P	Field mustard	cytosol	53.46	53.02
CDY43052	Canola	cytosol	53.46	53.02
Bra003007.1-P	Field mustard	cytosol	53.46	53.02
CDX92835	Canola	cytosol	53.74	52.86
Bra003009.1-P	Field mustard	cytosol	51.25	52.86
CDY19037	Canola	cytosol	53.46	52.3
KRH14071	Soybean	cytosol	29.64	51.94
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	59.56	51.19
CDY19039	Canola	cytosol	49.86	51.14
GSMUA_Achr9P18820_001	Banana	mitochondrion	46.26	47.85
CDY28789	Canola	cytosol	46.54	46.54
Bra022700.1-P	Field mustard	cytosol	46.54	46.54
CDY41780	Canola	cytosol	32.41	45.7
GSMUA_Achr11P...	Banana	cytosol	18.01	44.22
VIT_16s0098g00850.t01	Wine grape	cytosol	59.0	28.78

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0032259	GO:GO:0046983	EnsemblPlantsGene:GSMUA_Achr4G24480_001	EnsemblPlants:GSMUA_Achr4P24480_001	EnsemblPlants:GSMUA_Achr4T24480_001	InterPro:IPR016461
InterPro:IPR036388	UniProt:M0SRQ9	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100
PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases
SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI0002969CC9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

Caffeic acid 3-O-methyltransferase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G24480_001]

Coordinates

chr4:+:24275378..24276686

Molecular Weight (calculated)

40081.9 Da

IEP (calculated)

6.004

GRAVY (calculated)

0.045

Length

361 amino acids

Sequence
(BLAST)

001: MGSNTEVLQL SPEEDEEARL YAVQLVMAMA LPMTLKAAIE LRLLEIIVKA GPGAKLSAVD VASQLPTQNP QAADMVDRML RILAAYRIVS CTAEPGAAGQ
101: LLRKYGAAPV CKHLTENEDG VSMAPLCLFG LDKVRIDFWH YLKDAVLEGG TCFHKAYGMT AFEYNGTDPR FNKLFNECMR SHSSIITKKL LDIYCGFDDV
201: KVLVDVGGGT GAALHMITSR HPQIKGINFD LPHVISEAPS FPGVEHVSGD MFVSVPQSDT IFMKWILHDW NDEQCSKLLK NCWKALPEKG KLIVVEYVLP
301: LLPEPNLNLR GAFHLDINMM VFLGGKERTQ KEFEALALEA GFSGFTSTYI SMYTWVIEFK K

Best Arabidopsis Sequence Match ( AT1G77520.1 )
(BLAST)

001: MTNHLQDPLP TYPKPVLTKE EQEVDEKMVS LQAESIVNTV AFPMVLKAAF ELGVIDTIAA AGNDTWLSPC EIACSLPTKP TNPEAPVLLD RMLSLLVSHS
101: ILKCRMIETG ENGRTGKIER VYAAEPVCKY FLRDSDGTGS LVPLFMLLHT QVFFKTWTNL KDVILEGRDA FNSAHGMKIF EYINSDQPFA ELFNRAMSEP
201: STMIMKKVLD VYRGFEDVNT LVDVGGGNGT VLGLVTSKYP HIKGVNFDLA QVLTQAPFYP GVEHVSGDMF VEVPKGDAVF MKWILHDWGD EDCIKILKNC
301: WKSLPEKGKI IIVEFVTPKE PKGGDLSSNT VFAMDLLMLT QCSGGKERSL SQFENLAFAS GFLRCEIICL AYSYSVIEFH K

Arabidopsis Description

O-methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9CAQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.