Factsheet for TraesCS1D01G033700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G032000.1	Wheat	cytosol	93.19	93.19
TraesCS1B01G040400.1	Wheat	cytosol	58.04	90.25
HORVU1Hr1G089700.1	Barley	cytosol, vacuole	79.56	79.78
Os04t0176200-00	Rice	cytosol	39.78	62.13
Os04t0104900-01	Rice	cytosol	58.04	60.17
Os04t0175600-01	Rice	plasma membrane	60.22	58.47
Os04t0175900-01	Rice	cytosol, plasma membrane	56.4	55.8
GSMUA_Achr2P04480_001	Banana	cytosol	28.88	46.29
TraesCS7D01G539100.1	Wheat	cytosol	42.23	44.03
TraesCS1D01G359500.1	Wheat	cytosol	27.52	43.16
TraesCS2D01G568300.1	Wheat	cytosol	41.42	43.06
TraesCS6D01G008200.1	Wheat	cytosol	41.14	42.78
TraesCS5D01G488900.1	Wheat	cytosol	40.87	42.49
TraesCS2D01G052200.1	Wheat	cytosol	40.87	42.37
CDY18302	Canola	cytosol	23.71	42.23
CDY18304	Canola	cytosol	23.71	42.23
TraesCS3D01G540200.1	Wheat	cytosol	40.87	42.13
TraesCS7D01G538900.1	Wheat	endoplasmic reticulum, vacuole	40.33	42.05
TraesCS5D01G528600.1	Wheat	cytosol	41.14	41.83
TraesCS7D01G341500.1	Wheat	cytosol, golgi, unclear	40.87	41.67
KRH14071	Soybean	cytosol	23.16	41.26
TraesCS5D01G488800.2	Wheat	cytosol	40.6	41.16
GSMUA_Achr2P04370_001	Banana	cytosol	40.05	40.61
GSMUA_AchrUn_...	Banana	cytosol	33.24	40.4
GSMUA_AchrUn_...	Banana	cytosol	39.51	40.17
GSMUA_AchrUn_...	Banana	cytosol, vacuole	38.96	39.61
Solyc03g080180.2.1	Tomato	extracellular	38.42	39.5
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	38.15	39.22
KRH64288	Soybean	cytosol, nucleus	38.69	38.9
PGSC0003DMT400001512	Potato	cytosol	38.15	38.57
GSMUA_AchrUn_...	Banana	cytosol	28.88	38.27
KRH64289	Soybean	cytosol	34.6	38.14
KRH53640	Soybean	cytosol	37.87	38.08
CDY19037	Canola	cytosol	38.15	37.94
CDY29856	Canola	cytosol	37.6	37.6
Bra019031.1-P	Field mustard	cytosol	37.6	37.6
KRH53638	Soybean	mitochondrion	37.33	37.53
KRH53639	Soybean	cytosol	37.33	37.43
Bra026320.1-P	Field mustard	cytosol	29.97	37.16
CDY55338	Canola	cytosol	29.97	37.16
CDY19039	Canola	cytosol	35.42	36.93
AT5G54160.1	Thale cress	cytosol	35.97	36.36
CDY18306	Canola	cytosol	35.97	36.26
CDX92835	Canola	cytosol	36.24	36.24
CDY14330	Canola	cytosol	35.69	36.19
Bra003007.1-P	Field mustard	cytosol	35.69	35.99
CDY14328	Canola	cytosol	35.69	35.99
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	41.14	35.95
CDY43839	Canola	cytosol	35.15	35.44
CDY43052	Canola	cytosol	35.15	35.44
Bra029041.1-P	Field mustard	cytosol	35.15	35.44
Bra003009.1-P	Field mustard	cytosol	33.52	35.14
TraesCS6D01G388700.1	Wheat	cytosol	35.42	35.14
CDY28789	Canola	cytosol	31.61	32.13
Bra022700.1-P	Field mustard	cytosol	31.61	32.13
CDY41780	Canola	cytosol	19.35	27.73
VIT_16s0098g00850.t01	Wine grape	cytosol	39.24	19.46

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS1D01G033700	EnsemblPlants:TraesCS1D01G033700.1	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:13797797..13802577

Molecular Weight (calculated)

39771.1 Da

IEP (calculated)

6.435

GRAVY (calculated)

0.049

Length

367 amino acids

Sequence
(BLAST)

001: MDNNTVRGSR MNPAAGDDDE GTWLHAWGLI TSFAVSMTLK AAIELGIFDA LSNAGSLAIT ADELAARLPT MDKAGGLAPV DRIMRLLASF DIVKCVTEAG
101: PSGEVIRHYK PSPVCRWLSS NHGGPSLAPY SMFTTDQDFL MAWQQLGAAA GGGQTAFKRT HGVPMGEHLG RNPRLLGVVD KAMVQISVMV TSKLLERFHG
201: FDGVAVLVDV GGGTGSTMEM ITCRYKHIRG INFDLPHVIS LAPSILGVEH IAGNMFDNVP TGDAIFLKTV LHMLDDNDCI KVLKNCHQAL PDKGRLIAVE
301: FVLPATPEVT RAAQNLYILD VMMLNNSEGG KERTAQEFLK LARESGFNGT FQSTYIFGNF WALEFTK

Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)

001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK

Arabidopsis Description

IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.