Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G54160.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G005600.1 | Wheat | cytosol | 94.9 | 94.9 |
| TraesCS6B01G011100.1 | Wheat | cytosol | 96.03 | 94.17 |
| TraesCS7D01G341500.1 | Wheat | cytosol, golgi, unclear | 90.37 | 88.61 |
| TraesCS3D01G540200.1 | Wheat | cytosol | 88.39 | 87.64 |
| TraesCS1D01G359500.1 | Wheat | cytosol | 50.99 | 76.92 |
| Zm00001d049541_P001 | Maize | cytosol, extracellular, mitochondrion | 77.9 | 75.55 |
| Os08t0157500-01 | Rice | cytosol, plasma membrane | 78.47 | 75.27 |
| EES14578 | Sorghum | cytosol | 76.77 | 74.86 |
| TraesCS7D01G539100.1 | Wheat | cytosol | 68.56 | 68.75 |
| TraesCS5D01G488900.1 | Wheat | cytosol | 68.56 | 68.56 |
| TraesCS2D01G568300.1 | Wheat | cytosol | 68.56 | 68.56 |
| TraesCS5D01G528600.1 | Wheat | cytosol | 68.27 | 66.76 |
| TraesCS5D01G488800.2 | Wheat | cytosol | 68.27 | 66.57 |
| TraesCS7D01G538900.1 | Wheat | endoplasmic reticulum, vacuole | 66.01 | 66.19 |
| TraesCS2D01G052200.1 | Wheat | cytosol | 63.74 | 63.56 |
| Solyc03g080180.2.1 | Tomato | extracellular | 63.46 | 62.75 |
| PGSC0003DMT400001512 | Potato | cytosol | 63.74 | 61.98 |
| CDY18304 | Canola | cytosol | 35.69 | 61.16 |
| CDY18302 | Canola | cytosol | 35.69 | 61.16 |
| KRH64288 | Soybean | cytosol, nucleus | 63.17 | 61.1 |
| KRH53640 | Soybean | cytosol | 62.89 | 60.82 |
| KRH53639 | Soybean | cytosol | 62.89 | 60.66 |
| AT5G54160.1 | Thale cress | cytosol | 62.32 | 60.61 |
| KRH53638 | Soybean | mitochondrion | 62.32 | 60.27 |
| CDY43839 | Canola | cytosol | 61.76 | 59.89 |
| Bra029041.1-P | Field mustard | cytosol | 61.47 | 59.62 |
| CDY43052 | Canola | cytosol | 61.47 | 59.62 |
| KRH64289 | Soybean | cytosol | 55.81 | 59.16 |
| CDY18306 | Canola | cytosol | 60.62 | 58.79 |
| Bra003007.1-P | Field mustard | cytosol | 60.34 | 58.52 |
| CDY14328 | Canola | cytosol | 60.34 | 58.52 |
| Bra003009.1-P | Field mustard | cytosol | 57.79 | 58.29 |
| CDY14330 | Canola | cytosol | 59.49 | 58.01 |
| CDY55338 | Canola | cytosol | 46.74 | 55.74 |
| Bra026320.1-P | Field mustard | cytosol | 46.74 | 55.74 |
| Bra019031.1-P | Field mustard | cytosol | 56.94 | 54.77 |
| CDY29856 | Canola | cytosol | 56.66 | 54.5 |
| CDX92835 | Canola | cytosol | 56.37 | 54.22 |
| CDY19037 | Canola | cytosol | 56.37 | 53.93 |
| CDY28789 | Canola | cytosol | 53.26 | 52.08 |
| Bra022700.1-P | Field mustard | cytosol | 53.26 | 52.08 |
| CDY19039 | Canola | cytosol | 51.27 | 51.42 |
| KRH14071 | Soybean | cytosol | 29.46 | 50.49 |
| CDY41780 | Canola | cytosol | 35.98 | 49.61 |
| TraesCS1D01G033700.1 | Wheat | cytosol | 42.78 | 41.14 |
| TraesCS6D01G388700.1 | Wheat | cytosol | 37.68 | 35.95 |
| VIT_16s0098g00850.t01 | Wine grape | cytosol | 64.87 | 30.95 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:21.6.1.7 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 |
| GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 |
| PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF120 | InterPro:Plant_MeTrfase_dimerisation |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS6D01G008200 | EnsemblPlants:TraesCS6D01G008200.1 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:3345111..3347189
Molecular Weight (calculated)
38457.6 Da
IEP (calculated)
5.799
GRAVY (calculated)
-0.023
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTADEEAC MFALQLGSSS ILPMTLKNAI ELGLLDTLVA ADGKLLSPAE LAAKLPSTAN PAAPDMVDRM LRLLASYKVV SCTLEEDKDG RLSRRYGAEP
101: VCKFLTPNEE GVSMAPLALM NQDKVLMESW YYLKDAVLDG GIPFNKAYGM SAFEYHGTDP RFNRVFNEGM KNHSIIITKK LLELYKGFNG VGTLVDVGGG
201: IGATVGAITA HYPTIKGINF DLSHVISEAP PFPGVTHVGG DMFQKIPSGD TILMKWILHD WSDEHCATLL KNCYDALPTH GKVMLVECIL PVNPEATPKA
301: QGGFHLDMIM LAHNPGGKER YEREFEALAK GAGFGAMKTT YIYANTWVIE FTK
101: VCKFLTPNEE GVSMAPLALM NQDKVLMESW YYLKDAVLDG GIPFNKAYGM SAFEYHGTDP RFNRVFNEGM KNHSIIITKK LLELYKGFNG VGTLVDVGGG
201: IGATVGAITA HYPTIKGINF DLSHVISEAP PFPGVTHVGG DMFQKIPSGD TILMKWILHD WSDEHCATLL KNCYDALPTH GKVMLVECIL PVNPEATPKA
301: QGGFHLDMIM LAHNPGGKER YEREFEALAK GAGFGAMKTT YIYANTWVIE FTK
001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL
Arabidopsis Description
OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.