Factsheet for TraesCS6B01G011100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G008200.1	Wheat	cytosol	94.17	96.03
TraesCS6A01G005600.1	Wheat	cytosol	93.06	94.9
TraesCS7B01G245500.1	Wheat	cytosol	89.72	89.72
TraesCS3B01G612000.1	Wheat	cytosol	87.5	88.48
Os08t0157500-01	Rice	cytosol, plasma membrane	77.22	75.54
Zm00001d049541_P001	Maize	cytosol, extracellular, mitochondrion	75.56	74.73
EES14578	Sorghum	cytosol	75.0	74.59
TraesCS2B01G617300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.72	66.38
TraesCS2B01G066100.1	Wheat	cytosol	65.56	66.11
TraesCS2B01G065800.1	Wheat	cytosol	20.56	66.07
Solyc03g080180.2.1	Tomato	extracellular	61.39	61.9
CDY18302	Canola	cytosol	35.28	61.65
CDY18304	Canola	cytosol	35.28	61.65
PGSC0003DMT400001512	Potato	cytosol	61.67	61.16
AT5G54160.1	Thale cress	cytosol	60.83	60.33
KRH64288	Soybean	cytosol, nucleus	60.83	60.0
TraesCS5B01G036200.1	Wheat	vacuole	58.33	59.83
KRH53640	Soybean	cytosol	60.56	59.73
CDY43839	Canola	cytosol	60.28	59.62
KRH53639	Soybean	cytosol	60.56	59.56
Bra029041.1-P	Field mustard	cytosol	60.0	59.34
CDY43052	Canola	cytosol	60.0	59.34
TraesCS5B01G036100.1	Wheat	endoplasmic reticulum, vacuole	57.78	59.26
KRH53638	Soybean	mitochondrion	60.0	59.18
CDY18306	Canola	cytosol	59.17	58.52
Bra003007.1-P	Field mustard	cytosol	58.89	58.24
CDY14328	Canola	cytosol	58.89	58.24
Bra003009.1-P	Field mustard	cytosol	56.39	58.0
CDY14330	Canola	cytosol	58.06	57.73
KRH64289	Soybean	cytosol	53.33	57.66
CDY55338	Canola	cytosol	45.28	55.07
Bra026320.1-P	Field mustard	cytosol	45.28	55.07
Bra019031.1-P	Field mustard	cytosol	55.0	53.95
CDY29856	Canola	cytosol	54.72	53.68
CDX92835	Canola	cytosol	54.44	53.41
CDY19037	Canola	cytosol	54.72	53.39
Bra022700.1-P	Field mustard	cytosol	52.5	52.35
CDY28789	Canola	cytosol	52.5	52.35
CDY19039	Canola	cytosol	50.28	51.42
CDY41780	Canola	cytosol	35.56	50.0
KRH14071	Soybean	cytosol	28.06	49.03
TraesCS3B01G448600.1	Wheat	cytosol	45.0	43.78
TraesCS1B01G041100.1	Wheat	cytosol	41.11	40.33
TraesCS1B01G040400.1	Wheat	cytosol	26.11	39.83
TraesCS6B01G449400.1	Wheat	cytosol	38.33	37.3
VIT_16s0098g00850.t01	Wine grape	cytosol	62.78	30.54

Protein Annotations

Gene3D:1.10.10.10	MapMan:21.6.1.7	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS6B01G011100	EnsemblPlants:TraesCS6B01G011100.1	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:6628528..6630537

Molecular Weight (calculated)

39136.3 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.004

Length

360 amino acids

Sequence
(BLAST)

001: MGSTATDMAA SAHEEACMFA LQLGSSSILP MTLKNSIELG LLDTLVAADG KLLSPAELAA KLPSTANPAA PDMVDRMLRL LASYKVVSCT LEEDKDGRLS
101: RRYGAEPVCK FLTPNEEGVS MAPLALMNQD KVLMESWYYL KDAVLDGGIP FNKAHGMSAF EYHGTDPRFN RVFNEGMKNH SIIITKKLLE LYKGFNGLDT
201: LVDVGGGIGA TVGAITAHYP TVKGINFDLP HVISEAPPFS GVTHVGGDMF QKIPSGDTIL MKWILHDWSD EHCATLLKNC YDALPAHGKV VLVECILPVN
301: PEATPEAQGG FHLDMIMLAH NPGGRERYER EFEALAKGAG FGAIKTTYIY ANIWVIEFTK

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.