Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G54160.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G119660.1 | Barley | cytosol | 91.74 | 88.95 |
| TraesCS3B01G612000.1 | Wheat | cytosol | 67.81 | 66.85 |
| TraesCS7B01G245500.1 | Wheat | cytosol | 67.81 | 66.11 |
| TraesCS6B01G011100.1 | Wheat | cytosol | 66.38 | 64.72 |
| TraesCS2B01G066100.1 | Wheat | cytosol | 58.97 | 57.98 |
| TraesCS2B01G065800.1 | Wheat | cytosol | 17.95 | 56.25 |
| TraesCS5B01G036200.1 | Wheat | vacuole | 54.7 | 54.7 |
| TraesCS5B01G036100.1 | Wheat | endoplasmic reticulum, vacuole | 54.42 | 54.42 |
| CDY18302 | Canola | cytosol | 31.62 | 53.88 |
| CDY18304 | Canola | cytosol | 31.62 | 53.88 |
| Solyc03g080180.2.1 | Tomato | extracellular | 52.71 | 51.82 |
| PGSC0003DMT400001512 | Potato | cytosol | 52.71 | 50.96 |
| KRH64288 | Soybean | cytosol, nucleus | 52.42 | 50.41 |
| KRH53640 | Soybean | cytosol | 52.14 | 50.14 |
| KRH53638 | Soybean | mitochondrion | 51.85 | 49.86 |
| AT5G54160.1 | Thale cress | cytosol | 51.57 | 49.86 |
| KRH53639 | Soybean | cytosol | 51.85 | 49.73 |
| CDY14330 | Canola | cytosol | 51.0 | 49.45 |
| Bra003007.1-P | Field mustard | cytosol | 50.71 | 48.9 |
| CDY14328 | Canola | cytosol | 50.71 | 48.9 |
| CDY43839 | Canola | cytosol | 50.71 | 48.9 |
| Bra003009.1-P | Field mustard | cytosol | 48.72 | 48.86 |
| Bra019031.1-P | Field mustard | cytosol | 51.0 | 48.77 |
| CDY18306 | Canola | cytosol | 50.43 | 48.63 |
| Bra029041.1-P | Field mustard | cytosol | 50.43 | 48.63 |
| CDY43052 | Canola | cytosol | 50.43 | 48.63 |
| Bra026320.1-P | Field mustard | cytosol | 40.74 | 48.31 |
| CDY55338 | Canola | cytosol | 40.74 | 48.31 |
| KRH64289 | Soybean | cytosol | 45.58 | 48.05 |
| CDY29856 | Canola | cytosol | 50.14 | 47.96 |
| CDX92835 | Canola | cytosol | 50.14 | 47.96 |
| KRH14071 | Soybean | cytosol | 27.64 | 47.09 |
| CDY19037 | Canola | cytosol | 48.43 | 46.07 |
| CDY19039 | Canola | cytosol | 45.87 | 45.74 |
| CDY28789 | Canola | cytosol | 45.01 | 43.77 |
| Bra022700.1-P | Field mustard | cytosol | 45.01 | 43.77 |
| TraesCS3B01G448600.1 | Wheat | cytosol | 45.58 | 43.24 |
| CDY41780 | Canola | cytosol | 30.48 | 41.8 |
| TraesCS1B01G040400.1 | Wheat | cytosol | 27.92 | 41.53 |
| TraesCS1B01G041100.1 | Wheat | cytosol | 43.02 | 41.14 |
| TraesCS6B01G449400.1 | Wheat | cytosol | 36.75 | 34.86 |
| VIT_16s0098g00850.t01 | Wine grape | cytosol | 54.13 | 25.68 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 |
| GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 |
| PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF114 | InterPro:Plant_MeTrfase_dimerisation |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS2B01G617300 | EnsemblPlants:TraesCS2B01G617300.1 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:793906218..793907350
Molecular Weight (calculated)
38042.1 Da
IEP (calculated)
5.106
GRAVY (calculated)
0.114
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEEACMFA LQLATSAILP MTLRTCIELG LLETLAGAGG KPLTPEEVAA KLPSNSNPEA AAMVDRLLRV LAAYKVVSCV VEECEDGGLS RRYGAEPVCK
101: WLTANEDGVS MAPFCLLAQD RLFMEAWCHM KEAVLEGGSA FTKAFGSSWF EHAATDARFN RVFNEAMKQH SVIITKKLLE LYPGFEGIGT LVDVAGGLGA
201: VLHSITTKYP SIKGVNFDLP HVISEAQPYP GVEHVGGDMF QMVPSGDAIL MKWILNCFSD QECAKLLKNC YDALPAHGKV INVECILPAK PAATNSAQGL
301: ISTDVCLLAY SPGGKERYLR DLEKLAKGAG FTGVKATYIY ADFWAMEYTK Y
101: WLTANEDGVS MAPFCLLAQD RLFMEAWCHM KEAVLEGGSA FTKAFGSSWF EHAATDARFN RVFNEAMKQH SVIITKKLLE LYPGFEGIGT LVDVAGGLGA
201: VLHSITTKYP SIKGVNFDLP HVISEAQPYP GVEHVGGDMF QMVPSGDAIL MKWILNCFSD QECAKLLKNC YDALPAHGKV INVECILPAK PAATNSAQGL
301: ISTDVCLLAY SPGGKERYLR DLEKLAKGAG FTGVKATYIY ADFWAMEYTK Y
001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK
Arabidopsis Description
At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.