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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G54160.1 Os10t0114400-01 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G341500.1 Wheat cytosol, golgi, unclear 82.07 83.89
TraesCS7A01G333900.1 Wheat cytosol 81.79 83.61
Zm00001d049541_P001 Maize cytosol, extracellular, mitochondrion 82.61 83.52
TraesCS7B01G245500.1 Wheat cytosol 81.52 83.33
HORVU7Hr1G082280.1 Barley cytosol 81.25 83.06
TraesCS3D01G540200.1 Wheat cytosol 79.89 82.58
TraesCS3B01G612000.1 Wheat cytosol 79.62 82.3
EES14578 Sorghum cytosol 80.43 81.77
TraesCS3A01G534900.1 Wheat cytosol 78.26 80.9
TraesCS6D01G008200.1 Wheat cytosol 75.27 78.47
TraesCS6A01G005600.1 Wheat cytosol 74.18 77.34
TraesCS6B01G011100.1 Wheat cytosol 75.54 77.22
TraesCS1D01G359500.1 Wheat cytosol 46.2 72.65
HORVU3Hr1G116770.1 Barley cytosol 78.26 71.46
Solyc03g080180.2.1 Tomato extracellular 59.24 61.06
KRH53638 Soybean mitochondrion 60.05 60.55
PGSC0003DMT400001512 Potato cytosol 59.24 60.06
KRH64288 Soybean cytosol, nucleus 59.51 60.0
AT5G54160.1 Thale cress cytosol 58.97 59.78
KRH53640 Soybean cytosol 59.24 59.73
CDY18304 Canola cytosol 33.42 59.71
CDY18302 Canola cytosol 33.42 59.71
KRH53639 Soybean cytosol 59.24 59.56
CDY18306 Canola cytosol 57.61 58.24
CDY43839 Canola cytosol 57.34 57.97
CDY43052 Canola cytosol 57.07 57.69
Bra029041.1-P Field mustard cytosol 57.07 57.69
Bra003007.1-P Field mustard cytosol 56.79 57.42
CDY14328 Canola cytosol 56.79 57.42
KRH64289 Soybean cytosol 51.9 57.36
CDY14330 Canola cytosol 55.43 56.35
Bra026320.1-P Field mustard cytosol 44.84 55.74
CDY55338 Canola cytosol 44.84 55.74
Bra003009.1-P Field mustard cytosol 52.99 55.71
Bra019031.1-P Field mustard cytosol 54.62 54.77
Os12t0240900-01 Rice cytosol 55.43 54.4
CDY29856 Canola cytosol 53.8 53.95
CDX92835 Canola cytosol 53.53 53.68
CDY19037 Canola cytosol 53.53 53.39
CDY28789 Canola cytosol 51.9 52.91
Bra022700.1-P Field mustard cytosol 51.9 52.91
CDY19039 Canola cytosol 49.73 51.99
Os04t0104900-01 Rice cytosol 47.55 49.44
Os04t0176200-00 Rice cytosol 31.52 49.36
CDY41780 Canola cytosol 33.15 47.66
KRH14071 Soybean cytosol 26.63 47.57
Os04t0175600-01 Rice plasma membrane 47.83 46.56
Os04t0175900-01 Rice cytosol, plasma membrane 46.2 45.82
Os12t0202700-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 25.82 42.99
Os02t0823400-01 Rice cytosol 36.96 37.26
Os12t0199500-00 Rice cytosol 20.92 36.84
VIT_16s0098g00850.t01 Wine grape cytosol 59.78 29.73
Protein Annotations
Gene3D:1.10.10.10MapMan:21.6.1.7Gene3D:3.40.50.150EntrezGene:4344702EMBL:AB122056EMBL:AK064768
ProteinID:BAC99512.1ProteinID:BAF22945.1ProteinID:BAT03903.1ProteinID:BAT03904.1EMBL:DQ288259EMBL:DQ530257
ProteinID:EAZ41571.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0008171GO:GO:0009058GO:GO:0009809GO:GO:0009987GO:GO:0016740GO:GO:0017096
GO:GO:0019748GO:GO:0030187GO:GO:0030744GO:GO:0032259GO:GO:0046983GO:GO:0047763
GO:GO:0051555GO:GO:0102822InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
EnsemblPlantsGene:Os08g0157500EnsemblPlants:Os08t0157500-01PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683
PANTHER:PTHR11746PANTHER:PTHR11746:SF120InterPro:Plant_MeTrfase_dimerisationUniProt:Q6ZD89InterPro:SAM-dependent_MTasesSUPFAM:SSF46785
SUPFAM:SSF53335UniParc:UPI00001D8D2FInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfRefSeq:XP_015650053.1SEG:seg
Description
O-METHYLTRANSFERASE 9Caffeic acid O-methyltransferase, Flavonoid 3'-O-methyltransferase, Melatonin biosynthesis, Tricin biosynthesis (Os08t0157500-01);Similar to Quercetin 3-O-methyltransferase 1. (Os08t0157500-02)
Coordinates
chr8:-:3337804..3340918
Molecular Weight (calculated)
39751.7 Da
IEP (calculated)
5.404
GRAVY (calculated)
-0.006
Length
368 amino acids
Sequence
(BLAST)
001: MGSTAADMAA AADEEACMYA LQLASSSILP MTLKNAIELG LLETLQSAAV AGGGGKAALL TPAEVADKLP SKANPAAADM VDRMLRLLAS YNVVRCEMEE
101: GADGKLSRRY AAAPVCKWLT PNEDGVSMAA LALMNQDKVL MESWYYLKDA VLDGGIPFNK AYGMTAFEYH GTDARFNRVF NEGMKNHSVI ITKKLLDLYT
201: GFDAASTVVD VGGGVGATVA AVVSRHPHIR GINYDLPHVI SEAPPFPGVE HVGGDMFASV PRGGDAILMK WILHDWSDEH CARLLKNCYD ALPEHGKVVV
301: VECVLPESSD ATAREQGVFH VDMIMLAHNP GGKERYEREF RELARAAGFT GFKATYIYAN AWAIEFTK
Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)
001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL
Arabidopsis Description
OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.