Factsheet for TraesCS5D01G488900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G528600.1	Wheat	cytosol	72.24	70.64
TraesCS5D01G488800.2	Wheat	cytosol	72.24	70.44
TraesCS3D01G540200.1	Wheat	cytosol	70.54	69.94
TraesCS5B01G036200.1	Wheat	vacuole	69.41	69.8
TraesCS7D01G341500.1	Wheat	cytosol, golgi, unclear	70.25	68.89
TraesCS6D01G008200.1	Wheat	cytosol	68.56	68.56
TraesCS5B01G036100.1	Wheat	endoplasmic reticulum, vacuole	67.71	68.09
TraesCS2D01G052200.1	Wheat	cytosol	66.86	66.67
TraesCS1D01G359500.1	Wheat	cytosol	43.91	66.24
TraesCS7D01G538900.1	Wheat	endoplasmic reticulum, vacuole	64.02	64.2
TraesCS7D01G539100.1	Wheat	cytosol	64.02	64.2
TraesCS2D01G568300.1	Wheat	cytosol	63.17	63.17
HORVU1Hr1G089620.1	Barley	cytosol	65.72	61.87
CDY18304	Canola	cytosol	32.01	54.85
CDY18302	Canola	cytosol	32.01	54.85
PGSC0003DMT400001512	Potato	cytosol	55.81	54.27
Solyc03g080180.2.1	Tomato	extracellular	54.67	54.06
KRH53640	Soybean	cytosol	54.67	52.88
KRH53639	Soybean	cytosol	54.67	52.73
Bra026320.1-P	Field mustard	cytosol	44.19	52.7
CDY55338	Canola	cytosol	44.19	52.7
KRH64288	Soybean	cytosol, nucleus	54.39	52.6
AT5G54160.1	Thale cress	cytosol	53.82	52.34
KRH53638	Soybean	mitochondrion	54.11	52.33
CDY18306	Canola	cytosol	53.82	52.2
CDY14330	Canola	cytosol	52.97	51.66
CDY43839	Canola	cytosol	53.26	51.65
CDY43052	Canola	cytosol	52.97	51.37
CDY14328	Canola	cytosol	52.97	51.37
Bra029041.1-P	Field mustard	cytosol	52.97	51.37
Bra003007.1-P	Field mustard	cytosol	52.97	51.37
KRH64289	Soybean	cytosol	48.44	51.35
Bra003009.1-P	Field mustard	cytosol	50.71	51.14
Bra019031.1-P	Field mustard	cytosol	52.69	50.68
CDY19037	Canola	cytosol	52.69	50.41
CDY29856	Canola	cytosol	51.84	49.86
KRH14071	Soybean	cytosol	28.9	49.51
CDX92835	Canola	cytosol	51.27	49.32
CDY19039	Canola	cytosol	47.88	48.01
CDY28789	Canola	cytosol	48.16	47.09
Bra022700.1-P	Field mustard	cytosol	48.16	47.09
CDY41780	Canola	cytosol	32.01	44.14
TraesCS1D01G033700.1	Wheat	cytosol	42.49	40.87
TraesCS6D01G388700.1	Wheat	cytosol	37.39	35.68
VIT_16s0098g00850.t01	Wine grape	cytosol	56.09	26.76

Protein Annotations

Gene3D:1.10.10.10	MapMan:21.6.1.7	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS5D01G488900	EnsemblPlants:TraesCS5D01G488900.1	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:524259550..524261054

Molecular Weight (calculated)

38619.7 Da

IEP (calculated)

5.231

GRAVY (calculated)

0.034

Length

353 amino acids

Sequence
(BLAST)

001: MGSISDDEAA CIYAMQLAAA AVLPMTLKNA IELGMIEILV GAGGKMLSPS EVAAQLPSTA NAEAPAIVDR MLRLLASHNV VSCEVEEGKD GRLARRYGTA
101: PVCKWLSPDE DGVSLAPMVL LNDKVMLESW YHLKDTVLNG GLPFEKAYGM TAFDYQGTDP RFNRVFNEAM KTHSMIITKK LLEFYKGFDG VGTLVDVGGG
201: VGATIHTILC RYPSIEGVNF DLPHVISEAP SFAGVHHIGG DMFKKVPSGD AILMKWILHD WNDEHCTTLL SNCYDALPAH GKVVIVEYIL PVKPDETATA
301: QRSFEADMIM LTHTPGGKER YLREYEELAR SAGFASVKAT YVYSNIWVIE LNK

Best Arabidopsis Sequence Match ( AT1G51990.2 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWYNV QHAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.