Factsheet for TraesCS6A01G405200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G388700.1	Wheat	cytosol	96.97	95.14
TraesCS6B01G449400.1	Wheat	cytosol	96.14	94.32
HORVU6Hr1G092780.2	Barley	cytosol	33.61	89.71
Os02t0823400-01	Rice	cytosol	84.02	83.56
Zm00001d051870_P001	Maize	cytosol	84.02	81.55
EES06050	Sorghum	cytosol, plastid	84.3	81.17
HORVU6Hr1G092840.2	Barley	cytosol	63.36	78.23
GSMUA_Achr11P...	Banana	cytosol	29.75	73.47
KRH21852	Soybean	cytosol, nucleus	61.98	63.38
KRH13467	Soybean	cytosol	61.98	63.2
CDY70033	Canola	cytosol	39.39	62.17
AT3G53140.1	Thale cress	cytosol	60.06	60.72
VIT_08s0007g04520.t01	Wine grape	cytosol	58.13	58.94
Bra040689.1-P	Field mustard	cytosol	58.13	58.77
CDX95399	Canola	cytosol	57.58	58.22
Solyc10g085830.1.1	Tomato	plastid	56.47	56.79
PGSC0003DMT400022143	Potato	cytosol	56.2	56.51
CDX76223	Canola	cytosol	40.77	55.22
TraesCS4A01G344100.1	Wheat	cytosol	25.07	38.89
TraesCS6A01G005600.1	Wheat	cytosol	36.36	37.39
TraesCS3A01G534900.1	Wheat	cytosol	36.36	37.08
TraesCS7A01G333900.1	Wheat	cytosol	36.64	36.94
TraesCS2A01G051600.2	Wheat	cytosol	35.26	35.85
TraesCS1A01G032000.1	Wheat	cytosol	35.81	35.42
TraesCS1A01G407500.1	Wheat	cytosol	31.13	35.2

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:7.9.6.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0008938	GO:GO:0009987	GO:GO:0016740	GO:GO:1901847
InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PIRSF:PIRSF005739
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF90	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335
EnsemblPlantsGene:TraesCS6A01G405200	EnsemblPlants:TraesCS6A01G405200.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	TIGR:cd02440	:

Description

No Description!

Coordinates

chr6A:-:611328563..611330608

Molecular Weight (calculated)

38906.8 Da

IEP (calculated)

4.761

GRAVY (calculated)

0.067

Length

363 amino acids

Sequence
(BLAST)

001: MLSTPPAAGV AEELTPPEAR LAMMELANMI AVPMALTAVI RLGVPAAVWA GGANAPLSAA ELLPPGHPDP SVLERLLRLL ASRGVFSEHA ADGRPERRYA
101: LTAVGRTLVP SGASGASYAD YVLQHHQDAL VLAWPRLHEA VLDPAGPEPF ARAHAGVPAY AYYGQDRDAN EVMLRAMTGV SEPFMEALLD GYEGGFEGVA
201: TLVDVGGSSG ACLEMIMRRV PTIREGVNFD LPDVVAAAPT IAGVKHVGGD MFKSIPSGDA IFMKWVLTTW TNDECTAILK KCHEALPEGG KLIACEPVVP
301: ETTDASTRTR ALLENDIFVM TTYRTQGRER SEEEFRQLGL TAGFAGFRAL YLDPFYAVLE YVK

Best Arabidopsis Sequence Match ( AT3G53140.1 )
(BLAST)

001: MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK

Arabidopsis Description

AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.