Factsheet for Bra000612.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003171.1-P
Bra007047.1-P
Bra036288.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50180.1	Bra003171.1-P	AT3G54120.1	21798944
AT5G50180.1	Bra007047.1-P	AT3G54120.1	21798944
AT5G50180.1	Bra036288.1-P	AT4G01920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64638	Canola	cytosol	100.0	100.0
CDY34048	Canola	cytosol	100.0	100.0
AT5G50180.1	Thale cress	cytosol	94.3	95.66
Solyc02g093410.2.1	Tomato	cytosol	81.2	80.74
PGSC0003DMT400032824	Potato	cytosol	81.2	80.74
VIT_17s0000g09290.t01	Wine grape	cytosol	80.06	79.83
KRH54319	Soybean	cytosol	79.49	79.26
KRH63627	Soybean	cytosol	78.35	78.12
KXG27334	Sorghum	cytosol	75.21	76.97
Bra025563.1-P	Field mustard	cytosol	75.5	75.93
Zm00001d050947_P007	Maize	cytosol	75.78	75.35
Os02t0594100-01	Rice	cytosol	74.93	74.72
TraesCS6A01G208500.1	Wheat	cytosol	74.36	74.57
Bra025286.1-P	Field mustard	cytosol	75.5	74.44
GSMUA_Achr9P01860_001	Banana	cytosol	74.36	74.36
TraesCS6D01G192100.1	Wheat	cytosol	74.07	74.29
HORVU6Hr1G053310.1	Barley	cytosol	74.36	74.15
TraesCS6B01G237600.2	Wheat	cytosol	74.36	73.73
GSMUA_Achr6P06670_001	Banana	cytosol	73.79	73.58
EES05353	Sorghum	cytosol	73.22	73.01
GSMUA_AchrUn_...	Banana	cytosol	43.87	72.3
GSMUA_AchrUn_...	Banana	cytosol	31.34	70.51
Bra028913.1-P	Field mustard	cytosol	57.55	60.66
Bra037152.1-P	Field mustard	cytosol	42.45	37.63
Bra012094.1-P	Field mustard	cytosol, nucleus, plastid	42.73	37.41
Bra027048.1-P	Field mustard	mitochondrion, plastid	36.47	32.99
Bra036661.1-P	Field mustard	mitochondrion	36.47	32.82
Bra007859.1-P	Field mustard	cytosol	35.9	31.03
Bra011250.1-P	Field mustard	cytosol	36.18	30.75
Bra010247.1-P	Field mustard	cytosol	35.61	30.56
Bra024020.1-P	Field mustard	cytosol	35.33	30.32
Bra007860.1-P	Field mustard	cytosol, plastid	35.04	30.07
Bra018183.1-P	Field mustard	cytosol	32.48	23.36
Bra020343.1-P	Field mustard	cytosol, plastid	33.9	23.24
Bra002606.1-P	Field mustard	cytosol, plastid	31.91	22.67
Bra006738.1-P	Field mustard	cytosol, plastid	32.19	22.47
Bra015215.1-P	Field mustard	cytosol	31.91	20.93
Bra011897.1-P	Field mustard	cytosol	33.05	20.57
Bra010744.1-P	Field mustard	cytosol	33.33	20.42
Bra010516.1-P	Field mustard	cytosol	32.19	19.86
Bra024497.1-P	Field mustard	cytosol	30.77	19.74
Bra002078.1-P	Field mustard	cytosol	31.34	19.4
Bra037258.1-P	Field mustard	cytosol	30.77	18.75
Bra032102.1-P	Field mustard	cytosol	34.76	14.63

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra000612	EnsemblPlants:Bra000612.1	EnsemblPlants:Bra000612.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4C8T4
PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44258	PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254019D	:	:	:

Description

AT5G50180 (E=2e-192) | protein kinase, putative

Coordinates

chrA03:+:12048930..12050765

Molecular Weight (calculated)

39348.8 Da

IEP (calculated)

8.062

GRAVY (calculated)

-0.211

Length

351 amino acids

Sequence
(BLAST)

001: MLAMDSLNGY RLEPKWEIDP QLLFVGPKIG EGAHAKVYEG KYKNQTVAIK IIHRGETPEE IAKRDSRFLR EVEMLSRVQH KNLVKFIGAC KEPVMVIVTE
101: LLQGGTLRKY LVNLRPACLE TPVAIGFALD IARGMECLHS HGIIHRDLKP ENLLLTADHK TVKLADFGLA REESLTEMMT AETGTYRWMA PELYSTVTLR
201: LGEKKHYNNK VDAYSFAIVL WELLHNKLPF EGMSNLQAAY AAAFKNVRPS AESLPEDLGV IVTSCWNEDP NARPNFTQII QLLLNYLSKV GSPALSAIPQ
301: RILASKNSLL PPDSPGTSSL MATKLDECGE TPKAKTEDKR KGLFFCFNQC Y

Best Arabidopsis Sequence Match ( AT5G50180.1 )
(BLAST)

001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY

Arabidopsis Description

At5g50180 [Source:UniProtKB/TrEMBL;Acc:Q9FGS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.