Factsheet for VIT_04s0008g03020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G24360.1	Thale cress	cytosol	83.21	84.43
VIT_11s0065g00140.t01	Wine grape	cytosol	82.25	83.66
GSMUA_Achr1P23740_001	Banana	cytosol	70.98	82.22
CDX72296	Canola	cytosol	80.34	81.91
CDY13414	Canola	cytosol	80.1	81.66
CDY36453	Canola	cytosol	79.86	81.42
CDY23284	Canola	cytosol	79.86	81.42
Bra024020.1-P	Field mustard	cytosol	79.86	81.42
Bra011250.1-P	Field mustard	cytosol	80.58	81.36
CDY28247	Canola	cytosol	80.58	81.36
Bra007860.1-P	Field mustard	cytosol, plastid	79.62	81.17
Bra010247.1-P	Field mustard	cytosol	79.62	81.17
CDX68725	Canola	cytosol	80.1	80.87
AT4G31170.5	Thale cress	cytosol	79.62	80.58
Os04t0608900-01	Rice	cytosol, plasma membrane	80.82	79.86
Zm00001d026267_P002	Maize	cytosol	79.38	79.76
EES12824	Sorghum	cytosol	79.14	79.71
Zm00001d002371_P001	Maize	cytosol	79.14	79.52
Bra007859.1-P	Field mustard	cytosol	77.22	79.31
CDY55245	Canola	cytosol	77.22	78.92
GSMUA_Achr10P...	Banana	cytosol	77.46	78.59
CDY20306	Canola	cytosol	77.22	78.54
GSMUA_Achr4P20740_001	Banana	cytosol	71.94	78.53
GSMUA_Achr7P15770_001	Banana	cytosol	77.7	77.7
GSMUA_Achr6P03680_001	Banana	cytosol	77.7	77.51
GSMUA_Achr7P04900_001	Banana	cytosol	77.22	77.4
Os08t0224100-01	Rice	cytosol	76.74	76.74
TraesCS7D01G289500.1	Wheat	cytosol	76.5	76.68
TraesCS7B01G182600.1	Wheat	cytosol	76.26	76.44
TraesCS7A01G292800.1	Wheat	cytosol	76.26	76.44
HORVU7Hr1G068410.1	Barley	cytosol	76.26	76.44
CDY55246	Canola	plasma membrane, vacuole	80.1	76.43
Zm00001d049361_P004	Maize	cytosol	77.46	76.36
EES13540	Sorghum	cytosol	75.54	75.54
Zm00001d024338_P006	Maize	cytosol	75.54	74.47
EES06353	Sorghum	cytosol	74.82	73.93
Os02t0174200-01	Rice	plasma membrane	74.1	73.4
TraesCS6A01G155200.2	Wheat	cytosol	73.38	73.21
TraesCS6D01G145100.2	Wheat	cytosol	73.38	73.21
HORVU6Hr1G031440.1	Barley	cytosol	73.38	72.68
TraesCS6B01G183300.1	Wheat	cytosol	73.62	72.07
HORVU7Hr1G109640.1	Barley	cytosol	73.14	71.76
TraesCS7D01G474700.1	Wheat	cytosol	72.9	71.53
TraesCS7B01G391300.1	Wheat	cytosol	72.66	71.29
Os06t0663400-01	Rice	cytosol, plasma membrane	73.14	71.26
TraesCS7A01G488200.1	Wheat	cytosol	72.9	71.19
CDY46142	Canola	mitochondrion	76.02	69.21
Zm00001d053770_P001	Maize	cytosol	57.79	68.27
KXG24726	Sorghum	vacuole	74.1	58.52
VIT_00s0684g00010.t01	Wine grape	mitochondrion	24.7	44.59
VIT_04s0023g01350.t01	Wine grape	cytosol	21.58	42.65
CDY34777	Canola	cytosol	77.46	39.39
Bra032102.1-P	Field mustard	cytosol	76.74	38.37
VIT_08s0058g01180.t01	Wine grape	cytosol	30.94	38.28
VIT_17s0000g08240.t01	Wine grape	cytosol	32.85	38.27
VIT_14s0066g00370.t01	Wine grape	cytosol	30.46	36.08
VIT_17s0000g09290.t01	Wine grape	cytosol	29.98	35.51
VIT_18s0001g00720.t01	Wine grape	cytosol	34.53	27.59
VIT_18s0166g00290.t01	Wine grape	cytosol	36.21	27.45
VIT_03s0038g03040.t01	Wine grape	cytosol	35.25	25.34
VIT_00s1430g00010.t01	Wine grape	nucleus	4.56	8.19

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100257625	wikigene:100257625	MapMan:18.4.1.30	Gene3D:3.30.200.20	UniProt:A5BI75
EMBL:AM460318	ProteinID:CAN72362	ProteinID:CAN72362.1	ProteinID:CCB46676	ProteinID:CCB46676.1	EMBL:FN595231
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100257625
wikigene:LOC100257625	PFAM:PF07714	PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR23257	PANTHER:PTHR23257:SF618	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TIGR:TC52314	TIGR:TC54709	TIGR:TC62269	TIGR:TC63648	UniParc:UPI0001521161
ArrayExpress:VIT_04s0008g03020	EnsemblPlantsGene:VIT_04s0008g03020	EnsemblPlants:VIT_04s0008g03020.t01	unigene:Vvi.657	RefSeq:XP_002283465	RefSeq:XP_002283465.1
RefSeq:XP_010648463.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:-:2501035..2518539

Molecular Weight (calculated)

46578.1 Da

IEP (calculated)

7.325

GRAVY (calculated)

-0.254

Length

417 amino acids

Sequence
(BLAST)

001: MVEGPKFTGI IGGGGNHNHD NNYFDFTQGF YQKLGEDSNM SIDSLQTSNA GLSVSMSVDN SSVGSNDSLT HILNHPGLKP VATHNYSVGH SVLRPGKGKV
101: THALNEDALA RALMDTRYPT EGLENYDEWT IDLRKLNMGT AFAQGAFGKL YRGEYNGDDV AIKILERPEN SPERAQVMEQ QFQQEVMMLA TLKHPNIVRF
201: IGACRKPLAW CIVTEYAKGG SVRQFLMRRQ NRSVPLKLAV KQALDVARGM AYVHGLGFIH RDLKSDNLLI AADKSIKIAD FGVARIEVQT EGMTPETGTY
301: RWMAPEMIQH RPYTQKVDVY SFGIVLWELI TGLLPFQNMT AVQAAFAVVN KGVRPIIPSD CLPVLSDIMT RCWDANPEVR PPFTEVVRML ENAEIEIMTT
401: VRKARFRCCM TQPMTTD

Best Arabidopsis Sequence Match ( AT4G31170.7 )
(BLAST)

001: MLENPKFDLH AVGNHNNDNN YYAFTQDFYQ KLGEEGTNMS VDSMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPMRHP YSLSDGQSVF RPGKVTHALN
101: DDALAQALMD SKYPTEGLVN YEEWTIDLRK LHMGPAFAQG AFGKLYRGTY NGEDVAIKLL ERSDSNPEKA QALEQQFQQE VSMLAFLKHP NIVRFIGACI
201: KPMVWCIVTE YAKGGSVRQF LTKRQNRAVP LKLAVMQALD VARGMAYVHE RNFIHRDLKS DNLLISADRS IKIADFGVAR IEVQTEGMTP ETGTYRWMAP
301: EMIQHRPYTQ KVDVYSFGIV LWELITGLLP FQNMTAVQAA FAVVNRGVRP TVPADCLPVL GEIMTRCWDA DPEVRPCFAE IVNLLEAAET EIMTNVRKAR
401: FRCCMTQPMT VD

Arabidopsis Description

AT4G31170 protein [Source:UniProtKB/TrEMBL;Acc:Q9M085]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.