Factsheet for VIT_18s0001g00720.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0684g00010.t01	Wine grape	mitochondrion	32.38	73.16
VIT_03s0038g03040.t01	Wine grape	cytosol	70.11	63.1
Solyc12g094410.1.1	Tomato	cytosol	64.18	58.88
KRH60972	Soybean	cytosol	59.58	58.46
EER99373	Sorghum	cytosol, plastid	54.79	53.76
Zm00001d021336_P004	Maize	cytosol, plastid	54.21	49.82
VIT_18s0166g00290.t01	Wine grape	cytosol	49.43	46.91
VIT_00s1430g00010.t01	Wine grape	nucleus	20.5	46.12
VIT_04s0023g01350.t01	Wine grape	cytosol	16.09	39.81
VIT_11s0065g00140.t01	Wine grape	cytosol	27.2	34.63
VIT_04s0008g03020.t01	Wine grape	cytosol	27.59	34.53
VIT_08s0058g01180.t01	Wine grape	cytosol	22.22	34.42
VIT_17s0000g08240.t01	Wine grape	cytosol	22.8	33.24
VIT_14s0066g00370.t01	Wine grape	cytosol	20.5	30.4
VIT_17s0000g09290.t01	Wine grape	cytosol	20.31	30.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:ACT_dom	ProteinID:CBI18907	ProteinID:CBI18907.3
ncoils:Coil	UniProt:E0CQV3	EMBL:FN595227	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR002912	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51671
PANTHER:PTHR44012	PANTHER:PTHR44012:SF6	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF55021	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE17A9	ArrayExpress:VIT_18s0001g00720	EnsemblPlantsGene:VIT_18s0001g00720	EnsemblPlants:VIT_18s0001g00720.t01

Description

No Description!

Coordinates

chr18:-:1477309..1491529

Molecular Weight (calculated)

59343.4 Da

IEP (calculated)

7.174

GRAVY (calculated)

-0.350

Length

522 amino acids

Sequence
(BLAST)

001: MRPGFDDELW AHFSRLPTRY ALDVNVERAE DVLTHKRLLQ LAHDPATRPA LEVRLVQVHP ISGGIHGDSD PSNPLKKVDA QSHYHTSQRS THPPSTFGLL
101: PNMKVLVEAK NSHVQDGEGD VDANLRFWRL MHEVIISTND KPKLLSQLTS LLSDIGLNIQ EAHAFSTTDG YSLDVFVVEG WAHEETEQLR NVLLKEIQMI
201: EKQPWSEFQL ISPGREQGHP EKQLIPSHIN LTIDGADVWE IDATLLKFEN KIASGSYGDL YKGTFCSQDV AIKVLKTQHL NEDMWREFSQ EVYIMRKVRH
301: KNIVQFIGAC TRPPSLCIVT EFMFGGSVYD FLHKQKGSFK LPSLLKVAID VSKGMNYLHQ NDIIHRDLKA ANILMDENKV VKVADFGVAR VQAQSGVMTA
401: ETGTYRWMAP EVIEHKPYDH KADVFSFGIV LWELLTGKLP YEHLTPLQAA VGVVQKGLRP TIPSHTYPSL VKLIKRCWHQ EPSLRPEFTE IMEILQQIAS
501: KVVEKKREIL EGRGKRQKEK SI

Best Arabidopsis Sequence Match ( AT4G35780.1 )
(BLAST)

001: MAIKEETEES CGSRAVVASI TKESPRQHRM KLEVYGEVLQ RIQESNYEEA NFPGFDDLLW LHFNRLPARY ALDVNVERAE DVLTHQRLLK LAEDPATRPV
101: FEVRCVQVSP TLNGNSGDVD PSDPAVNEDA QSSYNSRSLA PPTFGSSPNF EALTQAYKDH AQDDDSAVNA QLPNSRPMHE ITFSTIDRPK LLSQLTSMLG
201: ELGLNIQEAH AFSTADGFSL DVFVVDGWSQ EETEGLKDAL KKEIRKFKDQ PCSKQKSITF FEHDKSTNEL LPACVEIPTD GTDEWEIDMK QLKIEKKVAC
301: GSYGELFRGT YCSQEVAIKI LKPERVNAEM LREFSQEVYI MRKVRHKNVV QFIGACTRSP NLCIVTEFMT RGSIYDFLHK HKGVFKIQSL LKVALDVSKG
401: MNYLHQNNII HRDLKTANLL MDEHEVVKVA DFGVARVQTE SGVMTAETGT YRWMAPEVIE HKPYDHRADV FSYAIVLWEL LTGELPYSYL TPLQAAVGVV
501: QKGLRPKIPK ETHPKLTELL EKCWQQDPAL RPNFAEIIEM LNQLIREVGD DERHKDKHGG YFSGLKKGHR

Arabidopsis Description

STY17Serine/threonine-protein kinase STY17 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWL6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.