Factsheet for VIT_00s0684g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022377	Potato	cytosol	76.19	54.49
VIT_04s0023g01350.t01	Wine grape	cytosol	31.6	34.6
KRH76579	Soybean	cytosol	83.55	33.8
Solyc02g083290.2.1	Tomato	cytosol	81.39	33.45
VIT_03s0038g03040.t01	Wine grape	cytosol	82.68	32.93
VIT_18s0001g00720.t01	Wine grape	cytosol	73.16	32.38
Bra010516.1-P	Field mustard	cytosol	77.06	31.28
AT4G35780.1	Thale cress	cytosol	75.76	30.7
CDY07831	Canola	cytosol	73.59	30.09
CDY29191	Canola	cytosol	73.16	29.86
AT2G17700.1	Thale cress	cytosol	70.56	29.85
Bra024497.1-P	Field mustard	cytosol	70.56	29.8
KRH28871	Soybean	cytosol	78.79	29.35
Bra002078.1-P	Field mustard	cytosol	71.86	29.28
VIT_08s0058g01180.t01	Wine grape	cytosol	42.42	29.08
CDY20807	Canola	cytosol	71.0	28.92
CDY41632	Canola	plastid	77.49	28.14
Bra037258.1-P	Field mustard	cytosol	69.7	27.95
CDY30351	Canola	cytosol	71.43	27.78
CDY26822	Canola	cytosol	71.43	27.59
VIT_17s0000g08240.t01	Wine grape	cytosol	42.42	27.37
VIT_18s0166g00290.t01	Wine grape	cytosol	60.61	25.45
VIT_11s0065g00140.t01	Wine grape	cytosol	44.59	25.12
VIT_14s0066g00370.t01	Wine grape	cytosol	37.66	24.72
VIT_17s0000g09290.t01	Wine grape	cytosol	37.66	24.72
VIT_04s0008g03020.t01	Wine grape	cytosol	44.59	24.7
GSMUA_Achr1P14940_001	Banana	cytosol	29.44	14.95
VIT_00s1430g00010.t01	Wine grape	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100260791	wikigene:100260791	EntrezGene:100852947	wikigene:100852947	EntrezGene:100853511
wikigene:100853511	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:CBI35719	ProteinID:CBI35719.3	ProteinID:CCB59215
ProteinID:CCB59215.1	UniProt:D7TYZ3	EMBL:FN596308	EMBL:FN596476	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100260791	wikigene:LOC100260791	EntrezGene:LOC100852947	wikigene:LOC100852947
EntrezGene:LOC100853511	wikigene:LOC100853511	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR44012	PANTHER:PTHR44012:SF1	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC58090	UniParc:UPI0001BE48B3	ArrayExpress:VIT_00s0684g00010	EnsemblPlantsGene:VIT_00s0684g00010
EnsemblPlants:VIT_00s0684g00010.t01	unigene:Vvi.14734	RefSeq:XP_002278919	RefSeq:XP_002278919.2	RefSeq:XP_003635512	RefSeq:XP_003635512.1

Description

No Description!

Coordinates

chrUn:+:34161694..34167364

Molecular Weight (calculated)

26145.7 Da

IEP (calculated)

9.856

GRAVY (calculated)

-0.257

Length

231 amino acids

Sequence
(BLAST)

001: KIRHRNVVQF IGACTRPPNL CIITEFMSRG SVYDFLHKQR GAFKLPSLLK VAIDVAKGMN YLHENNIIHR DLKTANLLMD ENDVVKVADF GVARVQTQSG
101: VMTAETGTYR WMAPEVIEHR PYNHKADVFS FGIVLWELLT GELPYSFLTP LQAAVGVVQK GLRPTVPKHT HPKIAGLLER CWWQDPTLRP DFSTILEILH
201: QLANEVGGEG DSRRKDKSSG RFLSALRRGH H

Best Arabidopsis Sequence Match ( AT4G35780.1 )
(BLAST)

001: MAIKEETEES CGSRAVVASI TKESPRQHRM KLEVYGEVLQ RIQESNYEEA NFPGFDDLLW LHFNRLPARY ALDVNVERAE DVLTHQRLLK LAEDPATRPV
101: FEVRCVQVSP TLNGNSGDVD PSDPAVNEDA QSSYNSRSLA PPTFGSSPNF EALTQAYKDH AQDDDSAVNA QLPNSRPMHE ITFSTIDRPK LLSQLTSMLG
201: ELGLNIQEAH AFSTADGFSL DVFVVDGWSQ EETEGLKDAL KKEIRKFKDQ PCSKQKSITF FEHDKSTNEL LPACVEIPTD GTDEWEIDMK QLKIEKKVAC
301: GSYGELFRGT YCSQEVAIKI LKPERVNAEM LREFSQEVYI MRKVRHKNVV QFIGACTRSP NLCIVTEFMT RGSIYDFLHK HKGVFKIQSL LKVALDVSKG
401: MNYLHQNNII HRDLKTANLL MDEHEVVKVA DFGVARVQTE SGVMTAETGT YRWMAPEVIE HKPYDHRADV FSYAIVLWEL LTGELPYSYL TPLQAAVGVV
501: QKGLRPKIPK ETHPKLTELL EKCWQQDPAL RPNFAEIIEM LNQLIREVGD DERHKDKHGG YFSGLKKGHR

Arabidopsis Description

STY17Serine/threonine-protein kinase STY17 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWL6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.