CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY06478

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40540.1	CDY06478	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025563.1-P	Field mustard	cytosol	99.14	99.14
CDY36362	Canola	cytosol	98.57	98.57
AT5G40540.1	Thale cress	cytosol	90.83	89.8
CDY13723	Canola	cytosol	85.67	83.99
KRG93193	Soybean	cytosol	71.35	80.06
VIT_14s0066g00370.t01	Wine grape	cytosol	80.52	79.83
CDX83708	Canola	cytosol	82.52	79.12
KRH56528	Soybean	cytosol	77.94	78.61
Solyc02g093410.2.1	Tomato	cytosol	79.08	78.19
PGSC0003DMT400032824	Potato	cytosol	78.8	77.9
KRH07131	Soybean	cytosol	77.65	77.65
KRG94025	Soybean	cytosol	77.36	77.59
GSMUA_AchrUn_...	Banana	cytosol	45.85	75.12
KXG27334	Sorghum	cytosol	73.64	74.93
TraesCS6D01G192100.1	Wheat	cytosol	75.07	74.86
TraesCS6A01G208500.1	Wheat	cytosol	75.07	74.86
Zm00001d050947_P007	Maize	cytosol	75.64	74.79
GSMUA_Achr6P06670_001	Banana	cytosol	75.36	74.72
CDY64638	Canola	cytosol	75.07	74.64
CDY34048	Canola	cytosol	75.07	74.64
HORVU6Hr1G053310.1	Barley	cytosol	75.07	74.43
TraesCS6B01G237600.2	Wheat	cytosol	75.07	74.01
Os02t0594100-01	Rice	cytosol	74.21	73.58
EES05353	Sorghum	cytosol	73.35	72.73
GSMUA_Achr9P01860_001	Banana	cytosol	73.07	72.65
GSMUA_AchrUn_...	Banana	cytosol	31.23	69.87
CDY04825	Canola	cytosol	56.73	59.1
CDY53853	Canola	cytosol	43.55	38.19
CDY30760	Canola	cytosol	42.98	37.69
CDX81373	Canola	cytosol	42.69	37.63
CDY57129	Canola	cytosol	42.41	37.37
CDY63734	Canola	cytosol, plastid	34.96	31.61
CDY19547	Canola	mitochondrion	34.96	31.52
CDY12945	Canola	mitochondrion	34.96	31.44
CDY03279	Canola	mitochondrion	34.96	31.28
CDY08153	Canola	mitochondrion	34.67	31.11
CDY39795	Canola	mitochondrion	34.67	31.03
CDY55245	Canola	cytosol	36.1	30.88
CDY36453	Canola	cytosol	35.53	30.32
CDX72296	Canola	cytosol	35.53	30.32
CDY13414	Canola	cytosol	35.53	30.32
CDY23284	Canola	cytosol	35.53	30.32
CDX68725	Canola	cytosol	35.82	30.27
CDY28247	Canola	cytosol	35.82	30.27
CDY20306	Canola	cytosol	34.67	29.51
CDY55246	Canola	plasma membrane, vacuole	35.82	28.6
CDY46142	Canola	mitochondrion	35.24	26.86
CDX99086	Canola	cytosol, plastid	31.81	24.94
CDY02848	Canola	cytosol	32.38	23.49
CDX86103	Canola	cytosol	31.23	23.39
CDY32674	Canola	cytosol, plastid	32.38	23.16
CDX71145	Canola	cytosol, plastid	31.23	23.0
CDX80321	Canola	cytosol	31.23	22.95
CDX88676	Canola	cytosol, plastid	31.23	22.8
CDY32673	Canola	cytosol	31.23	22.71
CDY69707	Canola	cytosol, plastid	30.95	21.86
CDY70078	Canola	cytosol	32.95	21.66
CDY12083	Canola	cytosol	33.52	20.31
CDX90274	Canola	cytosol	33.52	20.31
CDY52799	Canola	cytosol	33.24	20.21
CDY07831	Canola	cytosol	31.81	19.65
CDY29191	Canola	cytosol	31.23	19.26
CDY20807	Canola	cytosol	30.66	18.87
CDY61898	Canola	cytosol	28.94	18.6
CDY38150	Canola	cytosol	28.94	18.5
CDY30351	Canola	cytosol	31.23	18.35
CDY26822	Canola	cytosol	31.23	18.23
CDY41632	Canola	plastid	31.81	17.45
CDY24361	Canola	cytosol	21.49	15.92
CDY34777	Canola	cytosol	36.39	15.49
CDY24360	Canola	cytosol	1.15	11.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078HVU6	UniProt:A0A078HVU6	EnsemblPlants:CDY42570
ProteinID:CDY42570	ProteinID:CDY42570.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00075064001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44258	PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF1ACF	:

Description

BnaA04g10430DBnaA04g10430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVU6]

Coordinates

chrLK032529:-:141558..143447

Molecular Weight (calculated)

39162.3 Da

IEP (calculated)

7.250

GRAVY (calculated)

-0.248

Length

349 amino acids

Sequence
(BLAST)

001: MGSGTGFYSD QLDPNWVVDP QHLFVGPKIG EGSHAKIYEG KYKNKTVAIK IIKKGESPEE IAKRDSRFAR EVSMLSKVQH KNLVKFIGAC KEPIMVIVTE
101: LLLGGTLRKY LVSLRPGRLD IRLAVGFALD IARAMECLHS HGIIHRDLKP ENLILTSDYK TVKLADFGLA REESLTEMMT AETGTYRWMA PELYSTVTLR
201: QGEKKHYNHK VDAYSFAIVL WELIHNKLPF EGMSNLQAAY AAAFKNVRPS ADDLPEELAM IVTSCWKEDP NDRPNFTEII QLLLRYLSTI SAPELVPPSM
301: KRVFSSENTV LPPESPGTCS LMAVRDGDQI TTDTNSPEKE GRGSFFFCC

Best Arabidopsis Sequence Match ( AT5G40540.1 )
(BLAST)

001: MGSVTGFYSN EVFELDPKWV VDPQHLFVGP KIGEGAHAKI YEGKYKNKTV AIKIVKRGES PEEIAKRESR FAREVSMLSR VQHKNLVKFI GACKEPIMVI
101: VTELLLGGTL RKYLVSLRPG SLDIRVAVGY ALDIARAMEC LHSHGVIHRD LKPESLILTA DYKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRHGEKKHY NHKVDAYSFA IVLWELIHNK LPFEGMSNLQ AAYAAAFKNV RPSADDLPKD LAMIVTSCWK EDPNDRPNFT EIIQMLLRCL STISSTELVP
301: PAIKRVFSSE NTVLPPESPG TCSLMTVRDK DQIPTDANSA QNEVRGSFFF FCC

Arabidopsis Description

Protein kinase ATN1 [Source:UniProtKB/TrEMBL;Acc:Q9FM43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.