CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19547	Canola	mitochondrion	96.37	96.12
CDY12945	Canola	mitochondrion	96.37	95.88
CDY08153	Canola	mitochondrion	95.34	94.6
CDY03279	Canola	mitochondrion	95.34	94.36
CDY39795	Canola	mitochondrion	94.82	93.85
AT1G62400.1	Thale cress	mitochondrion	94.04	93.08
PGSC0003DMT400060698	Potato	cytosol	77.72	88.24
PGSC0003DMT400034519	Potato	cytosol	77.2	88.17
Solyc04g014690.2.1	Tomato	mitochondrion	82.38	84.35
Solyc11g012050.1.1	Tomato	mitochondrion	80.31	82.89
KRH51152	Soybean	mitochondrion	81.09	82.15
KRH02003	Soybean	mitochondrion	80.83	81.89
KRH36528	Soybean	mitochondrion	76.17	77.98
KRH11513	Soybean	mitochondrion	75.39	76.98
GSMUA_AchrUn_...	Banana	cytosol	66.32	74.85
GSMUA_Achr1P09680_001	Banana	cytosol	65.28	73.68
TraesCS6B01G200100.1	Wheat	cytosol	59.33	67.16
TraesCS6A01G172600.1	Wheat	cytosol	58.55	66.28
Os06t0636600-01	Rice	plastid	68.13	66.08
TraesCS7B01G290700.1	Wheat	mitochondrion	67.62	65.91
Zm00001d046643_P001	Maize	mitochondrion	67.62	65.91
HORVU7Hr1G092030.2	Barley	mitochondrion	67.36	65.66
TraesCS7D01G384700.1	Wheat	mitochondrion	67.36	65.66
TraesCS7A01G388800.1	Wheat	mitochondrion	67.36	65.66
Zm00001d036771_P001	Maize	cytosol, mitochondrion	68.65	65.59
EER90083	Sorghum	cytosol, mitochondrion	68.65	65.27
TraesCS6D01G161600.1	Wheat	mitochondrion	60.62	59.69
HORVU0Hr1G015980.4	Barley	cytosol	60.88	59.19
Os03t0588400-00	Rice	cytosol	43.01	47.16
CDY34048	Canola	cytosol	33.16	36.47
CDY64638	Canola	cytosol	33.16	36.47
CDY04825	Canola	cytosol	31.61	36.42
CDY23284	Canola	cytosol	37.82	35.7
CDY36453	Canola	cytosol	37.82	35.7
CDX72296	Canola	cytosol	37.31	35.21
CDY13414	Canola	cytosol	37.05	34.96
CDY36362	Canola	cytosol	31.61	34.96
CDY42570	Canola	cytosol	31.61	34.96
CDX68725	Canola	cytosol	37.31	34.87
CDY28247	Canola	cytosol	37.31	34.87
CDY13723	Canola	cytosol	31.61	34.27
CDX80321	Canola	cytosol	41.19	33.47
CDY20306	Canola	cytosol	35.49	33.41
CDX71145	Canola	cytosol, plastid	40.67	33.12
CDX83708	Canola	cytosol	31.09	32.97
CDY55245	Canola	cytosol	34.72	32.84
CDY32673	Canola	cytosol	40.67	32.71
CDX88676	Canola	cytosol, plastid	40.41	32.64
CDY69707	Canola	cytosol, plastid	40.93	31.98
CDY02848	Canola	cytosol	39.64	31.81
CDY55246	Canola	plasma membrane, vacuole	35.75	31.58
CDY32674	Canola	cytosol, plastid	39.9	31.56
CDX99086	Canola	cytosol, plastid	35.75	31.01
CDX86103	Canola	cytosol	36.01	29.83
CDY46142	Canola	mitochondrion	35.23	29.69
CDY30760	Canola	cytosol	29.53	28.64
CDX81373	Canola	cytosol	29.27	28.54
CDY53853	Canola	cytosol	29.27	28.39
CDY57129	Canola	cytosol	28.76	28.03
CDY70078	Canola	cytosol	32.64	23.73
CDY52799	Canola	cytosol	33.42	22.47
CDY12083	Canola	cytosol	32.64	21.88
CDX90274	Canola	cytosol	32.64	21.88
CDY07831	Canola	cytosol	31.35	21.42
CDY61898	Canola	cytosol	29.27	20.81
CDY29191	Canola	cytosol	30.31	20.67
CDY38150	Canola	cytosol	29.02	20.51
CDY20807	Canola	cytosol	29.79	20.28
CDY26822	Canola	cytosol	30.57	19.73
CDY30351	Canola	cytosol	30.31	19.7
CDY41632	Canola	plastid	29.79	18.08
CDY34777	Canola	cytosol	34.97	16.46
CDY24361	Canola	cytosol	19.95	16.35
CDY24360	Canola	cytosol	1.04	11.76

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.30	MapMan:26.2.1.2	Gene3D:3.30.200.20	GO:A0A078JCE5	UniProt:A0A078JCE5	EnsemblPlants:CDY63734
ProteinID:CDY63734	ProteinID:CDY63734.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00039587001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF619	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	InterPro:Ser/Thr_kinase_HT1_plant	UniParc:UPI0004EEC60D	SEG:seg	:

Description

BnaCnng42530DBnaCnng42530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCE5]

Coordinates

chrLK034344:+:9830..11570

Molecular Weight (calculated)

43639.7 Da

IEP (calculated)

9.153

GRAVY (calculated)

-0.361

Length

386 amino acids

Sequence
(BLAST)

001: MPVSCFNPFL RRSKFPPEPS LPALSANPSS SKTNRYAESE TMDKKRFDSM ESWSMILESE NVETWETSKG EREEWTADLS QLFIGNKFAS GAHSRIYRGI
101: YKQRAVAVKM VRIPTHKEET RAKLELQFKS EVALLSRLFH PNIVQFIAAC KKPPVYCIIT EYMSQGNLRM YLNKKEPYSL SIETVLRLAL DISRGMEYLH
201: SQGVIHRDLK SNNLLLNDEM RVKVADFGTS CLETQCREAK GNMGTYRWMA PEMIKEKPYT RKVDVYSFGI VLWELTTALL PFQGMTPVQA AFAVAEKNER
301: PPLPASCQPA LAHLIKRCWS ENPSKRPDFS NIVAVLEKYD ECVKEGLPLT SHASLTKTKN AILDRLKGCI SAIGPPSSSS SVPINA

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.