Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0107400-01 | Rice | cytosol, nucleus | 14.71 | 8.47 |
| CDY20807 | Canola | cytosol | 100.0 | 6.0 |
| CDY07831 | Canola | cytosol | 67.65 | 4.07 |
| CDY29191 | Canola | cytosol | 64.71 | 3.89 |
| CDY30351 | Canola | cytosol | 55.88 | 3.2 |
| CDY26822 | Canola | cytosol | 55.88 | 3.18 |
| TraesCS6D01G070000.1 | Wheat | cytosol | 32.35 | 1.9 |
| TraesCS6B01G096400.1 | Wheat | cytosol | 32.35 | 1.9 |
| TraesCS6A01G071900.1 | Wheat | cytosol | 32.35 | 1.9 |
| CDY41632 | Canola | plastid | 35.29 | 1.89 |
| CDY38150 | Canola | cytosol | 29.41 | 1.83 |
| Zm00001d015032_P003 | Maize | cytosol | 29.41 | 1.75 |
| CDY52799 | Canola | cytosol | 29.41 | 1.74 |
| EES06176 | Sorghum | cytosol | 29.41 | 1.74 |
| CDY34048 | Canola | cytosol | 17.65 | 1.71 |
| CDY64638 | Canola | cytosol | 17.65 | 1.71 |
| CDY13723 | Canola | cytosol | 17.65 | 1.69 |
| CDY61898 | Canola | cytosol | 26.47 | 1.66 |
| CDY12083 | Canola | cytosol | 26.47 | 1.56 |
| CDX90274 | Canola | cytosol | 26.47 | 1.56 |
| CDY04825 | Canola | cytosol | 14.71 | 1.49 |
| CDY08153 | Canola | mitochondrion | 14.71 | 1.29 |
| CDY55245 | Canola | cytosol | 14.71 | 1.23 |
| CDY20306 | Canola | cytosol | 14.71 | 1.22 |
| CDY42570 | Canola | cytosol | 11.76 | 1.15 |
| CDY36362 | Canola | cytosol | 11.76 | 1.15 |
| CDY70078 | Canola | cytosol | 17.65 | 1.13 |
| CDX83708 | Canola | cytosol | 11.76 | 1.1 |
| CDX80321 | Canola | cytosol | 14.71 | 1.05 |
| CDY32673 | Canola | cytosol | 14.71 | 1.04 |
| CDY02848 | Canola | cytosol | 14.71 | 1.04 |
| CDY63734 | Canola | cytosol, plastid | 11.76 | 1.04 |
| CDY19547 | Canola | mitochondrion | 11.76 | 1.03 |
| CDY12945 | Canola | mitochondrion | 11.76 | 1.03 |
| CDY39795 | Canola | mitochondrion | 11.76 | 1.03 |
| CDY03279 | Canola | mitochondrion | 11.76 | 1.03 |
| CDY32674 | Canola | cytosol, plastid | 14.71 | 1.02 |
| CDY69707 | Canola | cytosol, plastid | 14.71 | 1.01 |
| CDY57129 | Canola | cytosol | 11.76 | 1.01 |
| CDY30760 | Canola | cytosol | 11.76 | 1.01 |
| CDY36453 | Canola | cytosol | 11.76 | 0.98 |
| CDY23284 | Canola | cytosol | 11.76 | 0.98 |
| CDX68725 | Canola | cytosol | 11.76 | 0.97 |
| CDY28247 | Canola | cytosol | 11.76 | 0.97 |
| CDY46142 | Canola | mitochondrion | 11.76 | 0.87 |
| CDX71145 | Canola | cytosol, plastid | 11.76 | 0.84 |
| CDX88676 | Canola | cytosol, plastid | 11.76 | 0.84 |
| CDX81373 | Canola | cytosol | 8.82 | 0.76 |
| CDY53853 | Canola | cytosol | 8.82 | 0.75 |
| CDY13414 | Canola | cytosol | 8.82 | 0.73 |
| CDX72296 | Canola | cytosol | 8.82 | 0.73 |
| CDY55246 | Canola | plasma membrane, vacuole | 8.82 | 0.69 |
| CDY34777 | Canola | cytosol | 14.71 | 0.61 |
| CDX99086 | Canola | cytosol, plastid | 5.88 | 0.45 |
| CDX86103 | Canola | cytosol | 5.88 | 0.43 |
| CDY24361 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_Achr8P34130_001 | Banana | cytosol | 0.0 | 0.0 |
| HORVU2Hr1G108060.1 | Barley | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY24360 | EnsemblPlantsGene:GSBRNA2T00026573001 | ProteinID:CDY24360 | ProteinID:CDY24360.1 | UniParc:UPI0004EF2679 | UniProt:A0A078GCY8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA07g02850DBnaA07g02850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCY8]
Coordinates
chrLK032157:-:419130..419332
Molecular Weight (calculated)
3964.8 Da
IEP (calculated)
5.663
GRAVY (calculated)
-0.553
Length
34 amino acids
Sequence
(BLAST)
(BLAST)
1: MLQQIMIEVG DEDPADKDKH CLGFLQAAFR KPRY
001: MVPSSETATV RVLCQKLLLS PNHPGTLQWL IGSPFFPPFT VVSTFRCIHH SPDFQQESDD LRKLLPKGFE VIGGLIIGDS DAEKSAFEAV RAARRLRKHL
101: SEGGELDDEK IVGASCDVGT GTIHFFISKS ENTTKLEPVG SVVYEDKSGK YLWENGCLLH CELPIKLPFY YPASSPSDSK EKFSDAIDAV ITQFKEPYVV
201: YIAETLKKAS GGVPKPVVLR GKDLGFGADA SNINRLPSAD QVSDIKMLSC SHLCLNNKTA PAVNSAENAD KIHISVLLNR SEKLPTSGAP VAEYFPAMEE
301: ARLIVVDLNL DVLTYAPKDL PLMHAVSNLV IPALVDQLYS LKKIILPHLL LRIYHFNPPG VLHPITSMYE LNYGETEMKQ VDVRKLLHLR LGLPLDRPLL
401: RIANALDLSV NDDSKSNMNR RGSTLLKDVH IGIPSSGVSE GVASIIQGSY EYYHYLQDGF DDSGWGCAYR SLQTIISWFR LQHYTSISVP SHREIQQTLV
501: EIGDKDPSFV GSREWIGAIE LSFVLDKLLG VSCKIMNFRS GSELPEKCRE LAMHFENQGT PIMIGGGVLA YTLLGVDYDE GSGDCAFLIL DPHYTGSEDH
601: KKIVNGGWCG WKKAVDSKGK SFFLHNKFYN LLLPQRPNMV
101: SEGGELDDEK IVGASCDVGT GTIHFFISKS ENTTKLEPVG SVVYEDKSGK YLWENGCLLH CELPIKLPFY YPASSPSDSK EKFSDAIDAV ITQFKEPYVV
201: YIAETLKKAS GGVPKPVVLR GKDLGFGADA SNINRLPSAD QVSDIKMLSC SHLCLNNKTA PAVNSAENAD KIHISVLLNR SEKLPTSGAP VAEYFPAMEE
301: ARLIVVDLNL DVLTYAPKDL PLMHAVSNLV IPALVDQLYS LKKIILPHLL LRIYHFNPPG VLHPITSMYE LNYGETEMKQ VDVRKLLHLR LGLPLDRPLL
401: RIANALDLSV NDDSKSNMNR RGSTLLKDVH IGIPSSGVSE GVASIIQGSY EYYHYLQDGF DDSGWGCAYR SLQTIISWFR LQHYTSISVP SHREIQQTLV
501: EIGDKDPSFV GSREWIGAIE LSFVLDKLLG VSCKIMNFRS GSELPEKCRE LAMHFENQGT PIMIGGGVLA YTLLGVDYDE GSGDCAFLIL DPHYTGSEDH
601: KKIVNGGWCG WKKAVDSKGK SFFLHNKFYN LLLPQRPNMV
Arabidopsis Description
Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 [Source:UniProtKB/TrEMBL;Acc:F4JDY2]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.