Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY24360 | Canola | cytosol | 8.47 | 14.71 |
Os03t0588400-00 | Rice | cytosol | 16.95 | 2.84 |
Os02t0594100-01 | Rice | cytosol | 13.56 | 2.27 |
Os07t0203925-00 | Rice | cytosol | 6.78 | 1.71 |
Os05t0519200-02 | Rice | cytosol | 16.95 | 1.66 |
Os06t0636600-01 | Rice | plastid | 8.47 | 1.26 |
Os01t0747400-01 | Rice | cytosol | 11.86 | 1.1 |
Os07t0475900-01 | Rice | cytosol, plasma membrane | 8.47 | 1.05 |
Os02t0174200-01 | Rice | plasma membrane | 6.78 | 0.95 |
Os01t0201200-01 | Rice | nucleus | 8.47 | 0.89 |
Os09t0544300-01 | Rice | plasma membrane | 8.47 | 0.83 |
Os12t0163800-01 | Rice | cytosol | 6.78 | 0.75 |
Os08t0224100-01 | Rice | cytosol | 5.08 | 0.72 |
Os04t0608900-01 | Rice | cytosol, plasma membrane | 5.08 | 0.71 |
Os06t0663400-01 | Rice | cytosol, plasma membrane | 5.08 | 0.7 |
Os02t0120100-01 | Rice | plasma membrane | 6.78 | 0.69 |
Os04t0686650-00 | Rice | cytosol | 5.08 | 0.65 |
Os06t0724900-01 | Rice | cytosol, plasma membrane | 3.39 | 0.35 |
Os07t0475800-01 | Rice | nucleus | 1.69 | 0.34 |
Os03t0816100-01 | Rice | cytosol | 0.0 | 0.0 |
HORVU2Hr1G108060.1 | Barley | cytosol, plastid | 0.0 | 0.0 |
GSMUA_Achr8P34130_001 | Banana | cytosol | 0.0 | 0.0 |
CDY24361 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:Os01t0107400-01 | EnsemblPlantsGene:Os01g0107400 | ProteinID:BAH90852.1 | ProteinID:BAS69981.1 | SEG:seg | UniParc:UPI0001B65F2F |
UniProt:C7IWH4 | MapMan:35.2 | : | : | : | : |
Description
Conserved hypothetical protein. (Os01t0107400-01)
Coordinates
chr1:-:392083..392578
Molecular Weight (calculated)
7176.4 Da
IEP (calculated)
8.559
GRAVY (calculated)
-1.108
Length
59 amino acids
Sequence
(BLAST)
(BLAST)
1: LESYIEALEE DPSFLQSYIP PPHPLHHHHH QHHNHHHQQS LLRCFPRYRT TRRSASLRV
001: MADVKIQSES ESSDSHPVVD NQPPPPPPPP QQPAKEEENQ PKTSPTPPPH WMRYPPTVII PHQMMYAPPP FPPYHQYPNH HHLHHQSRGN KHQNAFNGEN
101: KTIWVGDLHH WMDEAYLNSS FASGDEREIV SVKVIRNKNN GLSEGYGFVE FESHDVADKV LREFNGTTMP NTDQPFRLNW ASFSTGEKRL ENNGPDLSIF
201: VGDLSPDVSD NLLHETFSEK YPSVKAAKVV LDANTGRSKG YGFVRFGDEN ERTKAMTEMN GVKCSSRAMR IGPATPRKTN GYQQQGGYMP NGTLTRPEGD
301: IMNTTIFVGG LDSSVTDEDL KQPFNEFGEI VSVKIPVGKG CGFVQFVNRP NAEEALEKLN GTVIGKQTVR LSWGRNPANK QPRDKYGNQW VDPYYGGQFY
401: NGYGYMVPQP DPRMYPAAPY YPMYGGHQQQ VS
101: KTIWVGDLHH WMDEAYLNSS FASGDEREIV SVKVIRNKNN GLSEGYGFVE FESHDVADKV LREFNGTTMP NTDQPFRLNW ASFSTGEKRL ENNGPDLSIF
201: VGDLSPDVSD NLLHETFSEK YPSVKAAKVV LDANTGRSKG YGFVRFGDEN ERTKAMTEMN GVKCSSRAMR IGPATPRKTN GYQQQGGYMP NGTLTRPEGD
301: IMNTTIFVGG LDSSVTDEDL KQPFNEFGEI VSVKIPVGKG CGFVQFVNRP NAEEALEKLN GTVIGKQTVR LSWGRNPANK QPRDKYGNQW VDPYYGGQFY
401: NGYGYMVPQP DPRMYPAAPY YPMYGGHQQQ VS
Arabidopsis Description
RBP47CPolyadenylate-binding protein RBP47C [Source:UniProtKB/Swiss-Prot;Acc:Q9SX79]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.