Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74298 | Canola | plastid | 96.88 | 96.61 |
| CDY28679 | Canola | cytosol | 67.14 | 90.11 |
| AT3G01400.1 | Thale cress | cytosol | 88.1 | 87.61 |
| KRH15451 | Soybean | cytosol | 62.04 | 80.81 |
| CDY02828 | Canola | cytosol | 78.47 | 78.25 |
| KRH05594 | Soybean | cytosol | 77.62 | 77.84 |
| CDY32692 | Canola | peroxisome | 77.62 | 77.62 |
| Solyc12g088360.1.1 | Tomato | cytosol | 60.06 | 77.09 |
| Solyc04g077850.2.1 | Tomato | cytosol | 77.62 | 76.97 |
| PGSC0003DMT400027542 | Potato | cytosol | 76.77 | 76.12 |
| PGSC0003DMT400030161 | Potato | cytosol | 74.79 | 73.74 |
| KRH52088 | Soybean | cytosol | 63.74 | 68.81 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 73.09 | 66.49 |
| GSMUA_Achr4P03430_001 | Banana | cytosol | 46.74 | 61.34 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 58.92 | 57.94 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 58.07 | 57.42 |
| Os07t0587500-01 | Rice | cytosol | 58.07 | 56.63 |
| Zm00001d006726_P001 | Maize | cytosol | 57.51 | 56.39 |
| Zm00001d021978_P001 | Maize | cytosol | 57.79 | 56.35 |
| EER97464 | Sorghum | cytosol | 57.79 | 56.35 |
| TraesCS2B01G213900.1 | Wheat | cytosol | 57.22 | 55.96 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 57.22 | 55.96 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 56.94 | 55.68 |
| GSMUA_Achr10P... | Banana | cytosol | 58.07 | 55.11 |
| GSMUA_Achr4P14130_001 | Banana | cytosol | 48.16 | 48.99 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 55.52 | 48.28 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 54.11 | 46.14 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 57.79 | 43.31 |
| Os03t0435300-00 | Rice | cytosol | 43.34 | 38.25 |
| CDX90518 | Canola | plastid | 49.01 | 38.02 |
| CDY09688 | Canola | cytosol | 48.16 | 37.44 |
| Zm00001d003967_P001 | Maize | plastid | 44.48 | 34.89 |
| CDX74050 | Canola | cytosol | 28.33 | 21.93 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 37.39 | 21.71 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 37.39 | 21.67 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.98 | 21.6 |
| CDY71737 | Canola | cytosol | 27.76 | 21.21 |
| CDY12497 | Canola | cytosol | 35.69 | 21.11 |
| CDY08002 | Canola | cytosol | 27.2 | 21.1 |
| CDY28059 | Canola | cytosol | 27.48 | 21.0 |
| CDX76873 | Canola | cytosol, plastid | 43.91 | 20.75 |
| CDX78262 | Canola | cytosol | 40.51 | 20.37 |
| CDX78273 | Canola | cytosol | 36.54 | 20.35 |
| CDX73449 | Canola | cytosol | 40.23 | 20.17 |
| CDX72769 | Canola | cytosol | 34.56 | 19.93 |
| CDX96295 | Canola | cytosol, plasma membrane | 34.28 | 19.64 |
| CDY02891 | Canola | cytosol | 40.79 | 19.54 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 40.51 | 19.38 |
| CDY18649 | Canola | cytosol, plastid | 38.24 | 18.96 |
| CDX81323 | Canola | cytosol, plastid | 38.53 | 18.81 |
| CDY68037 | Canola | cytosol | 34.56 | 18.63 |
| CDX68379 | Canola | cytosol | 34.56 | 18.54 |
| CDX95193 | Canola | cytosol | 34.28 | 18.47 |
| CDX86080 | Canola | cytosol | 34.28 | 18.45 |
| CDY68352 | Canola | cytosol | 23.8 | 18.42 |
| CDX99112 | Canola | cytosol | 33.99 | 18.32 |
| CDY31736 | Canola | cytosol | 33.14 | 18.22 |
| CDY57440 | Canola | cytosol | 33.99 | 18.21 |
| CDX77213 | Canola | cytosol | 33.14 | 18.2 |
| CDY38506 | Canola | cytosol | 23.23 | 17.98 |
| CDY12838 | Canola | cytosol | 35.41 | 17.88 |
| CDX68380 | Canola | cytosol | 23.8 | 15.79 |
| CDY48332 | Canola | mitochondrion, plastid | 30.03 | 15.06 |
| CDX94661 | Canola | plastid | 30.31 | 15.05 |
| CDX70810 | Canola | cytosol | 20.11 | 15.04 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 43.63 | 14.91 |
| CDX90186 | Canola | mitochondrion | 29.75 | 14.73 |
| CDY37666 | Canola | cytosol, plastid | 26.91 | 14.37 |
| CDX99816 | Canola | plastid | 29.46 | 14.36 |
| CDY43332 | Canola | mitochondrion | 29.18 | 14.33 |
| CDX73439 | Canola | plastid | 36.54 | 14.32 |
| CDY38931 | Canola | cytosol | 24.93 | 14.31 |
| CDY43686 | Canola | plastid | 26.35 | 14.07 |
| CDY51235 | Canola | extracellular, golgi | 20.68 | 14.07 |
| CDY04747 | Canola | cytosol, golgi | 15.86 | 12.7 |
| CDX71307 | Canola | cytosol | 23.8 | 12.48 |
| CDY31406 | Canola | cytosol | 23.8 | 12.46 |
| CDX93411 | Canola | mitochondrion | 23.23 | 11.75 |
| CDY55050 | Canola | cytosol | 22.95 | 11.64 |
| CDY54132 | Canola | cytosol | 22.38 | 11.62 |
| CDY24520 | Canola | cytosol | 22.1 | 11.57 |
| CDX70805 | Canola | cytosol | 22.1 | 5.06 |
| CDY51234 | Canola | cytosol | 22.38 | 4.77 |
| CDY04344 | Canola | cytosol | 0.57 | 0.63 |
| CDY04342 | Canola | cytosol | 0.57 | 0.6 |
Protein Annotations
| EnsemblPlants:CDX91947 | EnsemblPlantsGene:GSBRNA2T00153583001 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:IPR000225 | InterPro:IPR011989 | PANTHER:PTHR23315 |
| PANTHER:PTHR23315:SF64 | PFAM:PF00514 | PFscan:PS50176 | ProteinID:CDX91947 | ProteinID:CDX91947.1 | SEG:seg |
| SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI0004EE512D | MapMan:35.1 | : | : |
Description
BnaC03g32490D
Coordinates
chrLK031870:-:944563..945624
Molecular Weight (calculated)
37693.3 Da
IEP (calculated)
7.343
GRAVY (calculated)
-0.077
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDNSAGFT YLGRNFSNLS VNDHSSAFSD CNSDRSGEFP SASSESRRLL LSCASDNSDD LIRHLVAHLD SSCSVDEQKQ AAMEIRLLSK HKPENRIKIA
101: KAGAVKPLIS LISSSDPQLQ EYGVTAILNL SLCDENKDLI ASSGAIKPLV RALKMGTPTA KENAACALLR LSQVEDNKVA IGRSGAIPLL VSLLETGGFR
201: AKKDASTALY SLCSAKENKL RAVQAGIMKP LVELMADFGS NMVDKSAFVM SLLMSVPESK PALVEEGGVP VLVEILEAGT QRQKEVAASI LLQLCEESVV
301: YRTMVAREGA IPPLVALTQA GTSRAKQKAE ALIEFLRQPR SGVTSNGGRS SQL
101: KAGAVKPLIS LISSSDPQLQ EYGVTAILNL SLCDENKDLI ASSGAIKPLV RALKMGTPTA KENAACALLR LSQVEDNKVA IGRSGAIPLL VSLLETGGFR
201: AKKDASTALY SLCSAKENKL RAVQAGIMKP LVELMADFGS NMVDKSAFVM SLLMSVPESK PALVEEGGVP VLVEILEAGT QRQKEVAASI LLQLCEESVV
301: YRTMVAREGA IPPLVALTQA GTSRAKQKAE ALIEFLRQPR SGVTSNGGRS SQL
001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.