Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31736 | Canola | cytosol | 95.96 | 96.11 |
| AT2G28830.1 | Thale cress | endoplasmic reticulum | 70.14 | 77.49 |
| Solyc11g066040.1.1 | Tomato | cytosol | 62.83 | 60.94 |
| PGSC0003DMT400001049 | Potato | cytosol | 62.21 | 60.24 |
| VIT_06s0004g04530.t01 | Wine grape | cytosol | 63.61 | 59.97 |
| CDX99112 | Canola | cytosol | 60.34 | 59.24 |
| CDX86080 | Canola | cytosol | 60.19 | 58.99 |
| CDX68379 | Canola | cytosol | 60.03 | 58.66 |
| Solyc06g076040.2.1 | Tomato | cytosol | 60.19 | 58.55 |
| PGSC0003DMT400078166 | Potato | cytosol | 59.72 | 58.09 |
| CDX68380 | Canola | cytosol | 47.12 | 56.95 |
| Os12t0570000-01 | Rice | cytosol | 45.41 | 56.48 |
| OQU79384 | Sorghum | cytosol | 54.74 | 52.85 |
| Zm00001d030732_P001 | Maize | cytosol | 54.59 | 52.78 |
| Zm00001d041548_P002 | Maize | cytosol | 54.59 | 52.23 |
| HORVU5Hr1G021270.1 | Barley | cytosol | 55.21 | 52.05 |
| TraesCS5A01G078400.1 | Wheat | cytosol | 55.37 | 52.05 |
| TraesCS5B01G087500.1 | Wheat | cytosol | 54.9 | 51.76 |
| TraesCS5D01G093700.1 | Wheat | cytosol | 54.9 | 51.61 |
| HORVU5Hr1G021280.1 | Barley | cytosol | 55.21 | 51.6 |
| GSMUA_Achr10P... | Banana | cytosol | 49.92 | 51.28 |
| TraesCS4A01G097700.1 | Wheat | cytosol | 55.83 | 50.21 |
| GSMUA_Achr5P28670_001 | Banana | cytosol | 44.48 | 50.18 |
| Zm00001d028623_P001 | Maize | cytosol | 55.52 | 49.17 |
| GSMUA_Achr5P07140_001 | Banana | cytosol | 47.9 | 49.04 |
| Os03t0275900-01 | Rice | cytosol | 54.9 | 48.62 |
| CDX78273 | Canola | cytosol | 47.28 | 47.95 |
| GSMUA_Achr6P34170_001 | Banana | cytosol | 48.99 | 47.44 |
| OQU92820 | Sorghum | cytosol | 54.9 | 47.13 |
| TraesCS4B01G206900.1 | Wheat | plastid | 55.83 | 46.87 |
| HORVU4Hr1G059610.2 | Barley | cytosol | 56.14 | 46.76 |
| TraesCS4D01G207700.2 | Wheat | plastid | 55.83 | 46.2 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 38.1 | 41.67 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 39.35 | 41.61 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 39.35 | 41.54 |
| CDY12497 | Canola | cytosol | 38.1 | 41.04 |
| CDY28679 | Canola | cytosol | 16.49 | 40.3 |
| CDX96295 | Canola | cytosol, plasma membrane | 38.57 | 40.26 |
| GSMUA_Achr10P... | Banana | cytosol | 53.34 | 39.7 |
| CDX72769 | Canola | cytosol | 37.64 | 39.54 |
| CDY04747 | Canola | cytosol, golgi | 26.59 | 38.78 |
| CDY68037 | Canola | cytosol | 39.04 | 38.32 |
| CDX95193 | Canola | cytosol | 38.88 | 38.17 |
| CDY28059 | Canola | cytosol | 24.88 | 34.63 |
| CDY71737 | Canola | cytosol | 24.73 | 34.42 |
| CDX74050 | Canola | cytosol | 24.26 | 34.21 |
| CDX73439 | Canola | plastid | 47.12 | 33.63 |
| CDY08002 | Canola | cytosol | 23.79 | 33.63 |
| CDX91947 | Canola | plastid | 18.2 | 33.14 |
| CDX74298 | Canola | plastid | 18.04 | 32.77 |
| CDY02828 | Canola | cytosol | 18.04 | 32.77 |
| CDY32692 | Canola | peroxisome | 17.88 | 32.58 |
| CDY38506 | Canola | cytosol | 21.77 | 30.7 |
| CDY68352 | Canola | cytosol | 21.46 | 30.26 |
| CDX90186 | Canola | mitochondrion | 32.35 | 29.17 |
| CDX94661 | Canola | plastid | 31.88 | 28.83 |
| CDY43332 | Canola | mitochondrion | 32.04 | 28.65 |
| CDX78262 | Canola | cytosol | 30.48 | 27.92 |
| CDY37666 | Canola | cytosol, plastid | 28.62 | 27.84 |
| CDY48332 | Canola | mitochondrion, plastid | 30.33 | 27.7 |
| CDX76873 | Canola | cytosol, plastid | 32.04 | 27.58 |
| CDY43686 | Canola | plastid | 28.3 | 27.53 |
| CDY02891 | Canola | cytosol | 31.42 | 27.41 |
| CDY18649 | Canola | cytosol, plastid | 30.33 | 27.39 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 31.42 | 27.37 |
| CDX73449 | Canola | cytosol | 29.86 | 27.27 |
| CDX81323 | Canola | cytosol, plastid | 30.64 | 27.25 |
| CDX99816 | Canola | plastid | 30.64 | 27.21 |
| CDX90518 | Canola | plastid | 19.13 | 27.03 |
| CDY31406 | Canola | cytosol | 27.99 | 26.71 |
| CDY09688 | Canola | cytosol | 18.82 | 26.65 |
| CDX71307 | Canola | cytosol | 27.84 | 26.6 |
| CDY12838 | Canola | cytosol | 27.99 | 25.75 |
| CDY57440 | Canola | cytosol | 26.13 | 25.49 |
| CDX70810 | Canola | cytosol | 18.2 | 24.79 |
| CDY38931 | Canola | cytosol | 23.64 | 24.72 |
| CDY54132 | Canola | cytosol | 24.11 | 22.79 |
| CDY55050 | Canola | cytosol | 24.57 | 22.7 |
| CDY24520 | Canola | cytosol | 23.64 | 22.55 |
| CDX93411 | Canola | mitochondrion | 24.42 | 22.49 |
| CDY51235 | Canola | extracellular, golgi | 17.88 | 22.16 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 32.04 | 19.94 |
| CDY04344 | Canola | cytosol | 9.49 | 19.12 |
| CDY04342 | Canola | cytosol | 9.64 | 18.62 |
| CDX70805 | Canola | cytosol | 18.82 | 7.85 |
| CDY51234 | Canola | cytosol | 18.97 | 7.36 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | GO:A0A078CQ64 | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Armadillo | EnsemblPlants:CDX77213 | ProteinID:CDX77213 | ProteinID:CDX77213.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00127876001 | InterPro:IPR000225 |
| InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | PFAM:PF00514 | PFAM:PF04564 | PFscan:PS50176 |
| PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF235 | SMART:SM00185 | SMART:SM00504 | SUPFAM:SSF48371 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE4CCC | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaC04g40080D
Coordinates
chrLK031809:-:2154656..2157927
Molecular Weight (calculated)
70909.8 Da
IEP (calculated)
5.141
GRAVY (calculated)
-0.160
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTELAKIL IESVKEIASI SDHRPPMKIH CAHLSRRLKL LLPMLEEIRD CKNSLPEESM MKALLSLRES LLHAKDLLIY ISQVSKIYLV LERDQVMVRF
101: QKVTALLEQA LSEIPYQSLE ISDELQEQVE LVLVQLRRSI GKGRGEKYDD ELYKDLLSLY DGATDSEILR RVAEKLQLMT VTDLTEESLA LLDMLSTSGG
201: DDPGESFEKM MMLLKNIKDF VQTYNPNLDD VPLRSKPSLS KAQDEDEKNV PEDFRCPISL KLISDPVIVS SGQTYDRECI KKWLEEGNTT CPKTQVTLTS
301: DTVTPNYALR SLIAQWCESN GIEPPKPSSS SSSSTSFSPP SDEQLKIEAL LCKLTSQRPE EQRSAAGEIR LLAKQNNHNR VVLAASGAIP LLVSLLMNFD
401: DPRTQEHAVT SILNLSIFQE NKGRIISTFG AVPGIVQVLK KGSMEARENA AATLFSLSVI DENKVTIGAA GAIPPLVNLL SEGSQRGKKD AGTALFNLCI
501: FQGNKGKAVR AGLVPVLMRL LTEPEGRMVD EALAILAILS SHPEGKVVVG AADAVAFMVD FIRSGSPRNK ENAAAVLVQL CSWDPQYLIE AEKLGVMGCL
601: IEMAENGTDR GKRKAAQLLN CFSRFNEQQK QSGLGVEDQV SLI
101: QKVTALLEQA LSEIPYQSLE ISDELQEQVE LVLVQLRRSI GKGRGEKYDD ELYKDLLSLY DGATDSEILR RVAEKLQLMT VTDLTEESLA LLDMLSTSGG
201: DDPGESFEKM MMLLKNIKDF VQTYNPNLDD VPLRSKPSLS KAQDEDEKNV PEDFRCPISL KLISDPVIVS SGQTYDRECI KKWLEEGNTT CPKTQVTLTS
301: DTVTPNYALR SLIAQWCESN GIEPPKPSSS SSSSTSFSPP SDEQLKIEAL LCKLTSQRPE EQRSAAGEIR LLAKQNNHNR VVLAASGAIP LLVSLLMNFD
401: DPRTQEHAVT SILNLSIFQE NKGRIISTFG AVPGIVQVLK KGSMEARENA AATLFSLSVI DENKVTIGAA GAIPPLVNLL SEGSQRGKKD AGTALFNLCI
501: FQGNKGKAVR AGLVPVLMRL LTEPEGRMVD EALAILAILS SHPEGKVVVG AADAVAFMVD FIRSGSPRNK ENAAAVLVQL CSWDPQYLIE AEKLGVMGCL
601: IEMAENGTDR GKRKAAQLLN CFSRFNEQQK QSGLGVEDQV SLI
001: MLRICFLSLA MLAKFTWCVL ERDQVMVKFQ KVTSLLEQAL SIIPYENLEI SDELKEQVEL VLVQLRRSLG KRGGDVYDDE LYKDVLSLYS GRGSVMESDM
101: VRRVAEKLQL MTITDLTQES LALLDMVSSS GGDDPGESFE KMSMVLKKIK DFVQTYNPNL DDAPLRLKSS LPKSRDDDRD MLIPPEEFRC PISLELMTDP
201: VIVSSGQTYE RECIKKWLEG GHLTCPKTQE TLTSDIMTPN YVLRSLIAQW CESNGIEPPK RPNISQPSSK ASSSSSAPDD EHNKIEELLL KLTSQQPEDR
301: RSAAGEIRLL AKQNNHNRVA IAASGAIPLL VNLLTISNDS RTQEHAVTSI LNLSICQENK GKIVYSSGAV PGIVHVLQKG SMEARENAAA TLFSLSVIDE
401: NKVTIGAAGA IPPLVTLLSE GSQRGKKDAA TALFNLCIFQ GNKGKAVRAG LVPVLMRLLT EPESGMVDES LSILAILSSH PDGKSEVGAA DAVPVLVDFI
501: RSGSPRNKEN SAAVLVHLCS WNQQHLIEAQ KLGIMDLLIE MAENGTDRGK RKAAQLLNRF SRFNDQQKQH SGLGLEDQIS LI
101: VRRVAEKLQL MTITDLTQES LALLDMVSSS GGDDPGESFE KMSMVLKKIK DFVQTYNPNL DDAPLRLKSS LPKSRDDDRD MLIPPEEFRC PISLELMTDP
201: VIVSSGQTYE RECIKKWLEG GHLTCPKTQE TLTSDIMTPN YVLRSLIAQW CESNGIEPPK RPNISQPSSK ASSSSSAPDD EHNKIEELLL KLTSQQPEDR
301: RSAAGEIRLL AKQNNHNRVA IAASGAIPLL VNLLTISNDS RTQEHAVTSI LNLSICQENK GKIVYSSGAV PGIVHVLQKG SMEARENAAA TLFSLSVIDE
401: NKVTIGAAGA IPPLVTLLSE GSQRGKKDAA TALFNLCIFQ GNKGKAVRAG LVPVLMRLLT EPESGMVDES LSILAILSSH PDGKSEVGAA DAVPVLVDFI
501: RSGSPRNKEN SAAVLVHLCS WNQQHLIEAQ KLGIMDLLIE MAENGTDRGK RKAAQLLNRF SRFNDQQKQH SGLGLEDQIS LI
Arabidopsis Description
PUB12PLANT U-BOX 12 [Source:TAIR;Acc:AT2G28830]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.