Factsheet for GSMUA_Achr10P13640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P07140_001	Banana	cytosol	63.58	63.38
GSMUA_Achr5P28670_001	Banana	cytosol	55.75	61.23
GSMUA_Achr6P34170_001	Banana	cytosol	63.74	60.09
VIT_06s0004g04530.t01	Wine grape	cytosol	62.46	57.33
TraesCS4A01G097700.1	Wheat	cytosol	65.02	56.92
KRH29807	Soybean	cytosol	59.74	56.58
Solyc11g066040.1.1	Tomato	cytosol	59.9	56.56
PGSC0003DMT400001049	Potato	cytosol	59.42	56.02
KRH24807	Soybean	cytosol	59.11	55.89
Zm00001d028623_P001	Maize	cytosol	64.06	55.23
Os03t0275900-01	Rice	cytosol	63.74	54.96
PGSC0003DMT400078166	Potato	cytosol	57.19	54.16
Solyc06g076040.2.1	Tomato	cytosol	57.19	54.16
OQU92820	Sorghum	cytosol	63.74	53.27
HORVU4Hr1G059610.2	Barley	cytosol	65.18	52.85
TraesCS4B01G206900.1	Wheat	plastid	64.54	52.74
TraesCS4D01G207700.2	Wheat	plastid	65.02	52.38
Bra033820.1-P	Field mustard	cytosol	54.31	51.67
CDX68379	Canola	cytosol	54.31	51.67
AT3G46510.1	Thale cress	cytosol	54.31	51.52
Bra018212.1-P	Field mustard	cytosol	53.35	51.31
GSMUA_Achr10P...	Banana	cytosol	70.77	51.27
CDX86080	Canola	cytosol	53.67	51.22
AT2G28830.1	Thale cress	endoplasmic reticulum	47.12	50.69
CDX99112	Canola	cytosol	53.04	50.69
CDX68380	Canola	cytosol	42.97	50.56
CDY31736	Canola	cytosol	51.6	50.31
CDX77213	Canola	cytosol	51.28	49.92
Bra035665.1-P	Field mustard	cytosol	51.92	49.85
GSMUA_Achr3P00280_001	Banana	cytosol	47.12	48.92
GSMUA_Achr1P24290_001	Banana	cytosol	45.53	46.64
KRG99865	Soybean	cytosol	40.89	41.49
GSMUA_Achr4P05030_001	Banana	cytosol	32.27	38.55
GSMUA_Achr9P12570_001	Banana	cytosol	18.37	38.33
GSMUA_Achr4P04900_001	Banana	cytosol	31.79	37.69
GSMUA_Achr8P25140_001	Banana	plastid	23.64	35.24
GSMUA_Achr9P15600_001	Banana	cytosol	36.58	33.88
GSMUA_Achr6P06560_001	Banana	cytosol	20.13	33.78
GSMUA_Achr4P03430_001	Banana	cytosol	14.06	32.71
GSMUA_Achr4P01530_001	Banana	plasma membrane	31.31	32.08
GSMUA_Achr9P01670_001	Banana	cytosol	23.16	31.12
GSMUA_Achr10P...	Banana	cytosol	18.53	31.02
GSMUA_Achr2P15530_001	Banana	mitochondrion	31.95	30.3
GSMUA_Achr6P36530_001	Banana	cytosol	30.51	28.94
GSMUA_Achr9P28820_001	Banana	mitochondrion	27.16	28.38
GSMUA_Achr7P22130_001	Banana	cytosol	28.43	28.12
GSMUA_Achr6P07710_001	Banana	cytosol	15.97	28.01
GSMUA_Achr3P18890_001	Banana	cytosol	15.5	27.02
GSMUA_Achr10P...	Banana	mitochondrion	19.49	26.99
GSMUA_Achr10P...	Banana	cytosol	15.97	26.88
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	17.41	26.85
GSMUA_Achr4P00200_001	Banana	plastid	30.19	26.85
GSMUA_Achr7P09440_001	Banana	mitochondrion	27.32	26.8
GSMUA_Achr5P21360_001	Banana	cytosol	31.15	25.69
GSMUA_Achr4P14130_001	Banana	cytosol	14.22	25.65
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	15.81	23.91
GSMUA_Achr4P06990_001	Banana	plastid	15.34	23.82
GSMUA_Achr4P11070_001	Banana	cytosol	15.81	23.46
GSMUA_Achr3P29830_001	Banana	cytosol	15.18	22.84
GSMUA_Achr5P16030_001	Banana	cytosol	16.29	21.66
GSMUA_Achr9P14560_001	Banana	cytosol	19.97	21.37
GSMUA_Achr3P06160_001	Banana	plastid	19.01	20.99
GSMUA_Achr1P22790_001	Banana	mitochondrion	14.7	20.31

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G13640_001	EnsemblPlants:GSMUA_Achr10P13640_001	EnsemblPlants:GSMUA_Achr10T13640_001	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	UniProt:M0RHZ0	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF142	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI000296E056	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

E3 ubiquitin-protein ligase SPL11 [Source:GMGC_GENE;Acc:GSMUA_Achr10G13640_001]

Coordinates

chr10:-:22181779..22186229

Molecular Weight (calculated)

69454.1 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.284

Length

626 amino acids

Sequence
(BLAST)

001: MAEEVKATAV VDGRALVERM AEAAEEISAI SDYRNAYRKQ FCDLSRRMKL LEPMFQELKE SKDPIPEQAV RSLVLLKRAL DSARELLRLG NEGSKIFLVL
101: EREKTTKRFL EVTVQLEQAL SEVPFDMLNI SDEVREQVEL VHAQFKRAKE RVDMIDMDLH RDLLSAYNMS TDANVDQSTL RRLAEKLQLL TISDLKQESL
201: ALHEMVVASD GDPGEIIEKM SMLLKKVKDF MQTQNPEMGT PTNKGPLPSN ERAKPPVIPD DFLCPISLEL MKDPVIVATG QTYERESIEK WLQAGHDTCP
301: KTRQRLSNKS LTPNYVLRSL IMQWSEANGF DPPKLPAQTA KSRPTCSSGE HAKVLDLISK LSSRSIDDQR SAAAELRLLA RRSAENRLCI AEAGAIPLLV
401: KLLSTLDVHT QENAVTALLN LSIFEDNKER IIISGAVPGI VHVLRRGSME ARENAAATLF SISVVDDYKI RIGNKGKAVR AGVVPILVGL LMDPEAGMME
501: ETLAILAILS SHSEGKAAIA AAEALPVLVE VIKSGSPRNK ENAAATLLHL CSGEQQQQHL AEAHEKGLMG LLQEMAENGT DRGKRKAAQL IQRMNRFLEQ
601: KRVAQAQAQA LVKQSGNPAL PDFDYR

Best Arabidopsis Sequence Match ( AT3G46510.1 )
(BLAST)

001: MEEEKASAAQ SLIDVVNEIA AISDYRITVK KLCYNLARRL KLLVPMFEEI RESNEPISED TLKTLMNLKE AMCSAKDYLK FCSQGSKIYL VMEREQVTSK
101: LMEVSVKLEQ SLSQIPYEEL DISDEVREQV ELVLSQFRRA KGRVDVSDDE LYEDLQSLCN KSSDVDAYQP VLERVAKKLH LMEIPDLAQE SVALHEMVAS
201: SGGDVGENIE EMAMVLKMIK DFVQTEDDNG EEQKVGVNSR SNGQTSTAAS QKIPVIPDDF RCPISLEMMR DPVIVSSGQT YERTCIEKWI EGGHSTCPKT
301: QQALTSTTLT PNYVLRSLIA QWCEANDIEP PKPPSSLRPR KVSSFSSPAE ANKIEDLMWR LAYGNPEDQR SAAGEIRLLA KRNADNRVAI AEAGAIPLLV
401: GLLSTPDSRI QEHSVTALLN LSICENNKGA IVSAGAIPGI VQVLKKGSME ARENAAATLF SLSVIDENKV TIGALGAIPP LVVLLNEGTQ RGKKDAATAL
501: FNLCIYQGNK GKAIRAGVIP TLTRLLTEPG SGMVDEALAI LAILSSHPEG KAIIGSSDAV PSLVEFIRTG SPRNRENAAA VLVHLCSGDP QHLVEAQKLG
601: LMGPLIDLAG NGTDRGKRKA AQLLERISRL AEQQKETAVS QPEEEAEPTH PESTTEAADT

Arabidopsis Description

PUB13U-box domain-containing protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.