Factsheet for Bra020360.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32692	Canola	peroxisome	97.45	97.45
Bra040513.1-P	Field mustard	cytosol	61.47	82.51
Bra001006.1-P	Field mustard	plastid	79.32	79.1
AT5G58680.1	Thale cress	cytosol	76.77	75.91
KRH15451	Soybean	cytosol	58.07	75.65
Solyc12g088360.1.1	Tomato	cytosol	58.07	74.55
KRH05594	Soybean	cytosol	73.09	73.3
Solyc04g077850.2.1	Tomato	cytosol	73.09	72.47
PGSC0003DMT400027542	Potato	cytosol	72.8	72.19
PGSC0003DMT400030161	Potato	cytosol	71.1	70.11
KRH52088	Soybean	cytosol	62.04	66.97
GSMUA_Achr4P03430_001	Banana	cytosol	48.16	63.2
VIT_18s0001g09130.t01	Wine grape	cytosol	69.12	62.89
GSMUA_Achr3P18890_001	Banana	cytosol	58.64	57.66
GSMUA_Achr6P07710_001	Banana	cytosol	58.07	57.42
Os07t0587500-01	Rice	cytosol	58.36	56.91
EER97464	Sorghum	cytosol	57.79	56.35
Zm00001d021978_P001	Maize	cytosol	57.79	56.35
TraesCS2D01G194400.1	Wheat	cytosol	57.22	55.96
TraesCS2B01G213900.1	Wheat	cytosol	57.22	55.96
TraesCS2A01G193000.1	Wheat	cytosol	56.94	55.68
Zm00001d006726_P001	Maize	cytosol	56.66	55.56
GSMUA_Achr10P...	Banana	cytosol	57.51	54.57
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	56.09	48.77
GSMUA_Achr4P14130_001	Banana	cytosol	47.88	48.7
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	55.24	47.1
GSMUA_Achr5P16030_001	Banana	cytosol	56.66	42.46
Os03t0435300-00	Rice	cytosol	43.63	38.5
Bra012713.1-P	Field mustard	cytosol	47.88	37.14
Zm00001d003967_P001	Maize	plastid	46.18	36.22
Bra038470.1-P	Field mustard	plastid	47.03	35.47
Bra024559.1-P	Field mustard	cytosol, plasma membrane	37.11	21.51
Bra012355.1-P	Field mustard	plasma membrane	35.69	21.43
Bra001247.1-P	Field mustard	cytosol	27.48	21.27
Bra029642.1-P	Field mustard	cytosol	27.48	21.0
Bra040374.1-P	Field mustard	cytosol	26.35	20.62
Bra007097.1-P	Field mustard	cytosol	40.23	20.23
Bra016165.1-P	Field mustard	cytosol, plasma membrane	35.13	20.13
Bra007105.1-P	Field mustard	cytosol	34.84	19.4
Bra014787.1-P	Field mustard	cytosol	40.51	19.38
Bra012155.1-P	Field mustard	cytosol	34.56	18.51
Bra037117.1-P	Field mustard	cytosol, plastid	38.24	18.39
Bra035665.1-P	Field mustard	cytosol	33.14	17.94
Bra033820.1-P	Field mustard	cytosol	33.14	17.78
Bra027977.1-P	Field mustard	cytosol	32.58	17.64
Bra018212.1-P	Field mustard	cytosol	32.29	17.51
Bra006451.1-P	Field mustard	cytosol	20.96	15.85
Bra032309.1-P	Field mustard	plastid	28.9	14.49
Bra032180.1-P	Field mustard	cytosol	23.8	14.38
Bra021899.1-P	Field mustard	plastid	26.63	14.22
Bra010834.1-P	Field mustard	mitochondrion	28.61	14.05
Bra001998.1-P	Field mustard	cytosol	23.51	13.9
Bra019022.1-P	Field mustard	cytosol	23.8	12.46
Bra019924.1-P	Field mustard	mitochondrion	22.38	11.37
Bra031521.1-P	Field mustard	cytosol	21.25	11.08
Bra002153.1-P	Field mustard	cytosol	24.65	6.37
Bra006452.1-P	Field mustard	cytosol	22.38	4.76

Protein Annotations

EnsemblPlants:Bra020360.1	EnsemblPlants:Bra020360.1-P	EnsemblPlantsGene:Bra020360	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	PFAM:PF00514	PFscan:PS50176	SEG:seg	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0002542FFE	UniProt:M4DV17	MapMan:35.1	:	:

Description

AT3G01400 (E=6e-124) | armadillo/beta-catenin repeat family protein

Coordinates

chrA02:+:6395353..6396414

Molecular Weight (calculated)

38270.0 Da

IEP (calculated)

7.345

GRAVY (calculated)

-0.240

Length

353 amino acids

Sequence
(BLAST)

001: MENRTGLTYM NRKLSGLTVT DDSSSAFSDC NSDRSGEFPP SSSENRRLFL SRAAENPDDL IRYLVSHLDS SSSSVDEQKQ AAMEIRLLTK DKPENRIKLA
101: RAGAIKPLIS LVSSSDPQLQ EHGVTAVLNL SLCDENKELI ASSGAIKPLV RVLKSGTPTA KENAACALLR LSQIEDNKIA IGRSGAIPHL VSLLETGGFR
201: GKKDAATALY SLCSAKENRT RAVESGVMKP LVELMADFDS NMVDKAAYVM NLLMSAAEAK PAVVEEGGVP VLVEIVEVGT QRQKEMGVSI LLQLCEESVV
301: YRTMVAREGA IAPVVALSQS SKSRAKLKAE ALIELLRQPR QQQQQQQLDS NRS

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.