CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g01460.t01	Wine grape	cytosol	73.67	54.51
PGSC0003DMT400077205	Potato	cytosol	66.99	50.22
Solyc06g051090.1.1	Tomato	cytosol	50.49	45.73
KRH04403	Soybean	mitochondrion	22.99	32.32
KRH17146	Soybean	cytosol	13.36	28.57
KRH65448	Soybean	plastid	26.92	28.07
KRG91959	Soybean	cytosol	33.4	26.94
KRH29807	Soybean	cytosol	34.77	26.78
KRH34817	Soybean	cytosol	33.2	26.74
KRH24807	Soybean	cytosol	34.77	26.74
KRH11061	Soybean	mitochondrion, plastid	36.54	25.98
KRH21208	Soybean	mitochondrion	36.54	25.98
KRH50347	Soybean	nucleus	32.22	25.08
KRG89279	Soybean	cytosol	32.02	25.04
KRH59027	Soybean	mitochondrion	34.18	24.34
KRG99865	Soybean	cytosol	29.47	24.31
KRH42917	Soybean	mitochondrion	33.99	24.2
KRH00831	Soybean	cytosol	29.86	23.94
KRH54418	Soybean	cytosol, plastid	32.02	23.87
KRH52088	Soybean	cytosol	15.32	23.85
KRH40395	Soybean	cytosol	29.67	23.78
KRH03317	Soybean	cytosol, plastid	31.04	23.37
KRH76105	Soybean	cytosol, plastid	32.22	23.36
KRH15451	Soybean	cytosol	12.38	23.25
KRG97080	Soybean	cytosol, nucleus	19.45	22.5
KRH68828	Soybean	cytosol	18.66	22.09
KRH05594	Soybean	cytosol	14.73	21.31
KRG99581	Soybean	cytosol	18.66	20.61
KRH46608	Soybean	cytosol	18.27	20.17
KRG92593	Soybean	cytosol	17.49	20.09
KRH33490	Soybean	cytosol	20.43	19.81
KRH69547	Soybean	cytosol, plastid	27.7	19.78
KRH01984	Soybean	cytosol	15.72	18.82
KRH51173	Soybean	cytosol	15.52	18.46
KRH11541	Soybean	plastid	16.11	17.94
KRH36562	Soybean	plastid	16.11	17.9
KRG98177	Soybean	cytosol	29.08	17.6
KRH72794	Soybean	plasma membrane	27.5	17.22
KRH30135	Soybean	cytosol	28.29	17.18
KRH32190	Soybean	cytosol	21.81	16.74
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.74	16.09
KRH67390	Soybean	cytosol, plastid	25.93	15.42

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02001273	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	EnsemblPlantsGene:GLYMA_02G264200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	UniProt:K7KAW8
EnsemblPlants:KRH73275	ProteinID:KRH73275	ProteinID:KRH73275.1	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF132	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI000295CAA7	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	:	:

Description

hypothetical protein

Coordinates

chr2:-:44944548..44946886

Molecular Weight (calculated)

56088.0 Da

IEP (calculated)

6.590

GRAVY (calculated)

-0.067

Length

509 amino acids

Sequence
(BLAST)

001: MNNVLSAMMV SPGLLPSGTL LDSLIHVCNE VGSMEKFPLV HTRNVSTMIR RIKLLSSLFE EIQETDTPLP PSSILCLTEL FSVIRRVKVL IQDCKDGSSL
101: WSLIQLEFIS NQFYVLVKEM GRALDILSLS LLNVTSDIKE QVELLHKQAK RAELLIDPRE LHRREQLIQV MANNSLQNKK KKGLVDFGKV EEILSSIGLR
201: TPSDYEEEIS KLEAEAQNQA GTGGLIVVSN INNLISLMCY SKSMIFKEGE SDTKEDWHSY DRISIAQWIN SGHHTCPKSG QRLIHTALIP NYALKSLVQQ
301: WCHDNNVPVD EPTTEGNKNS SKKLKEDAVD HISANKAAAD AVKMTAEFLV GKLATGSADI QRQAAYELRL LTKTGMVNRS VIAEVGAIPF LVTLLGSQDS
401: RIQEHAVTAL FNLSIFDNNK ILIMAAGAVD SIVEVLESGK TMEARENAAA SIYSLSMVDE CKVQIGGRPR AIPALVELLK EGTPIGKRDA ASALFNLAVY
501: NPNKVALRG

Best Arabidopsis Sequence Match ( AT1G23030.1 )
(BLAST)

001: MAGGIVSPAS LLDLIADIVE IPLNTGMFKK DCADLTRRVC LLTHLLEEIR DSTPIDSAAS SSSENDWWSD LVVGLQAAKR LLSTARFQAR DSSDGAAKRI
101: SFQFQCVTWK LEKALSNLPY DLYDISDEVG EQVELARSQL RRAMQRYGSL NSNKFSSALS EPMERDGFSN VIKIKAEEKL ESVSETLHFG EEEEKQSSPP
201: LRRSSSISLA YYLSKDADTD RLDKMVNKNT DESKKSDKLT IPVDFLCPVS LELMKDPVIV ATGQTYERAY IQRWIDCGNL TCPKTQQKLE NFTLTPNYVL
301: RSLISRWCAE HNIEQPAGYI NGRTKNSGDM SVIRALVQRL SSRSTEDRRN AVSEIRSLSK RSTDNRILIA EAGAIPVLVN LLTSEDVATQ ENAITCVLNL
401: SIYENNKELI MFAGAVTSIV QVLRAGTMEA RENAAATLFS LSLADENKII IGGSGAIPAL VDLLENGTPR GKKDAATALF NLCIYHGNKG RAVRAGIVTA
501: LVKMLSDSTR HRMVDEALTI LSVLANNQDA KSAIVKANTL PALIGILQTD QTRNRENAAA ILLSLCKRDT EKLITIGRLG AVVPLMDLSK NGTERGKRKA
601: ISLLELLRKA CQ

Arabidopsis Description

PUB11RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178WCR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.