Factsheet for TraesCS7A01G549700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G536300.1	Wheat	cytosol	95.67	95.81
TraesCS7B01G473200.1	Wheat	cytosol	96.13	92.14
HORVU7Hr1G121810.1	Barley	cytosol	89.01	89.7
KXG20946	Sorghum	cytosol	76.16	76.52
Zm00001d014845_P001	Maize	cytosol	75.7	76.29
TraesCS7A01G293900.1	Wheat	cytosol	69.81	70.03
GSMUA_Achr4P04900_001	Banana	cytosol	50.0	61.17
GSMUA_Achr4P05030_001	Banana	cytosol	49.54	61.07
Os06t0726900-00	Rice	cytosol	34.67	58.95
VIT_03s0038g03660.t01	Wine grape	cytosol	54.33	54.76
KRH40395	Soybean	cytosol	53.72	54.65
KRH00831	Soybean	cytosol	52.94	53.86
PGSC0003DMT400025648	Potato	cytosol	53.41	53.16
Solyc04g082440.2.1	Tomato	cytosol	53.41	53.16
Solyc12g094610.1.1	Tomato	cytosol	42.57	51.21
PGSC0003DMT400075612	Potato	cytosol	50.15	50.23
Bra027977.1-P	Field mustard	cytosol	50.62	50.15
CDX95193	Canola	cytosol	50.77	50.08
CDY68037	Canola	cytosol	50.77	50.08
AT5G42340.1	Thale cress	cytosol	50.77	49.7
KRH33490	Soybean	cytosol	39.94	49.14
VIT_18s0001g14180.t01	Wine grape	cytosol	52.01	49.12
TraesCS7A01G001900.1	Wheat	cytosol	33.59	40.94
TraesCS4A01G498700.1	Wheat	plastid	36.22	36.97
TraesCS5A01G078400.1	Wheat	cytosol	37.31	35.23
TraesCS6A01G293600.1	Wheat	cytosol	34.67	34.95
TraesCS4A01G097700.1	Wheat	cytosol	37.77	34.13
TraesCS2A01G276400.1	Wheat	nucleus	21.36	30.0
TraesCS2A01G193000.1	Wheat	cytosol	16.25	29.09
TraesCS1A01G300000.1	Wheat	cytosol	26.16	25.3
TraesCS3A01G390200.1	Wheat	cytosol	17.18	25.28
TraesCS6A01G190700.1	Wheat	plastid	27.4	24.41
TraesCS3A01G345800.1	Wheat	plastid	25.7	24.3
TraesCS3A01G521300.1	Wheat	cytosol	30.8	23.95
TraesCS2A01G190800.1	Wheat	cytosol	15.33	22.71
TraesCS5A01G198800.1	Wheat	cytosol, plasma membrane	24.61	22.68
TraesCS2A01G475600.1	Wheat	cytosol, plasma membrane	23.53	22.0
TraesCS3A01G410100.1	Wheat	cytosol	17.65	21.55
TraesCS3A01G410000.1	Wheat	cytosol	19.81	20.19

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514
PFAM:PF04564	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF49	SMART:SM00185
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7A01G549700	EnsemblPlants:TraesCS7A01G549700.1	InterPro:Ubox_domain
InterPro:Znf_RING/FYVE/PHD	TIGR:cd16664	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:+:723957332..723959577

Molecular Weight (calculated)

71478.8 Da

IEP (calculated)

6.458

GRAVY (calculated)

-0.221

Length

646 amino acids

Sequence
(BLAST)

001: MLSSLLGTRP AVEPEPPEPE PEPSGRQLSD GDLLDELVAT VGAAQAFQEF RRSHRKECFN LLRWLQLVLP LIEELQDASP PRPLTDDAHR RLALLSRAFQ
101: AARRLLRRCH DGSKIFLSLE SEAVQGSFRA VYEKINVALD GMPYSDIGIS DEVKEQVELI NTQLKRSKKR TDTQDMELAM DFMVVLQDKE DRSADRVILE
201: QLAKKLELQS LADLRAETMA IKKLINERNG QQPESTKQII DLLHKLKEVA GIDEKNILGE VHIPKYLEKC PSLMIPNDFL CPISLEIMTD PVIIASGRTY
301: ERRSIQKWLD AGQRTCPKTQ QPLAHLSLAP NFALKNLILQ WCEKNKVEMQ TRADEPPVEE EVNKEVLIPS LVKDLSSPNL DVQRKAAKKI RTLSKESPED
401: RTLITDSGGI AALVGLLQYP DKKIQDNAVT SLLNLSIDEV NKVLIAKGNA IPLIIEVLKN GNVEGQENSA AALFSLSMVD ENKVAIGALG GMAPLVDLLK
501: NGTIRGKKDA STAIFNLLLN HQNKLRAIEA GIVPVLLKTL DNTKLGMVDE ALSIFLLLGS NSACRGTIGT ESFVETLVRI IKEGTPKNKE CALSVILELG
601: SHNNALMVHA LGFGLHEHLT EIAKNGTSRA QRKANSLIQL AQKCES

Best Arabidopsis Sequence Match ( AT1G23030.1 )
(BLAST)

001: MAGGIVSPAS LLDLIADIVE IPLNTGMFKK DCADLTRRVC LLTHLLEEIR DSTPIDSAAS SSSENDWWSD LVVGLQAAKR LLSTARFQAR DSSDGAAKRI
101: SFQFQCVTWK LEKALSNLPY DLYDISDEVG EQVELARSQL RRAMQRYGSL NSNKFSSALS EPMERDGFSN VIKIKAEEKL ESVSETLHFG EEEEKQSSPP
201: LRRSSSISLA YYLSKDADTD RLDKMVNKNT DESKKSDKLT IPVDFLCPVS LELMKDPVIV ATGQTYERAY IQRWIDCGNL TCPKTQQKLE NFTLTPNYVL
301: RSLISRWCAE HNIEQPAGYI NGRTKNSGDM SVIRALVQRL SSRSTEDRRN AVSEIRSLSK RSTDNRILIA EAGAIPVLVN LLTSEDVATQ ENAITCVLNL
401: SIYENNKELI MFAGAVTSIV QVLRAGTMEA RENAAATLFS LSLADENKII IGGSGAIPAL VDLLENGTPR GKKDAATALF NLCIYHGNKG RAVRAGIVTA
501: LVKMLSDSTR HRMVDEALTI LSVLANNQDA KSAIVKANTL PALIGILQTD QTRNRENAAA ILLSLCKRDT EKLITIGRLG AVVPLMDLSK NGTERGKRKA
601: ISLLELLRKA CQ

Arabidopsis Description

PUB11RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178WCR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.