CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014845_P001	Maize	cytosol	94.71	95.01
TraesCS7D01G536300.1	Wheat	cytosol	77.45	77.21
HORVU7Hr1G121810.1	Barley	cytosol	76.21	76.44
TraesCS7A01G549700.1	Wheat	cytosol	76.52	76.16
TraesCS7B01G473200.1	Wheat	cytosol	76.98	73.44
EES15482	Sorghum	cytosol	69.98	69.98
GSMUA_Achr4P05030_001	Banana	cytosol	50.08	61.45
GSMUA_Achr4P04900_001	Banana	cytosol	49.61	60.42
Os06t0726900-00	Rice	cytosol	33.28	56.32
VIT_03s0038g03660.t01	Wine grape	cytosol	55.05	55.23
KRH40395	Soybean	cytosol	53.34	54.02
KRH00831	Soybean	cytosol	53.34	54.02
Solyc04g082440.2.1	Tomato	cytosol	53.19	52.7
PGSC0003DMT400025648	Potato	cytosol	53.19	52.7
CDX95193	Canola	cytosol	52.1	51.15
Solyc12g094610.1.1	Tomato	cytosol	42.61	51.02
Bra027977.1-P	Field mustard	cytosol	51.63	50.92
CDY68037	Canola	cytosol	51.79	50.84
PGSC0003DMT400075612	Potato	cytosol	50.86	50.7
AT5G42340.1	Thale cress	cytosol	51.48	50.15
VIT_18s0001g14180.t01	Wine grape	cytosol	53.03	49.85
KRH33490	Soybean	cytosol	40.44	49.52
EER87680	Sorghum	cytosol	37.64	40.27
OQU79384	Sorghum	cytosol	36.55	35.29
EES07310	Sorghum	cytosol	34.37	34.64
OQU92820	Sorghum	cytosol	38.57	33.11
EES06804	Sorghum	cytosol	23.48	32.54
EER97464	Sorghum	cytosol	16.64	29.56
EES04812	Sorghum	plastid	27.99	24.69
OQU78182	Sorghum	plastid	25.97	24.59
KXG33626	Sorghum	plastid	25.82	23.65
EES01872	Sorghum	cytosol	29.24	23.35
EER97453	Sorghum	plastid	16.64	22.86
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	25.04	22.55
KXG35540	Sorghum	plasma membrane	24.11	21.65
EES14396	Sorghum	cytosol	30.64	19.56

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A194YMX5	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083
EnsemblPlants:KXG20946	ProteinID:KXG20946	ProteinID:KXG20946.1	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF49	SMART:SM00185	SMART:SM00504	EnsemblPlantsGene:SORBI_3010G274100
SUPFAM:SSF48371	SUPFAM:SSF57850	unigene:Sbi.12771	UniParc:UPI0007F1D97F	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:60713127..60716360

Molecular Weight (calculated)

71367.9 Da

IEP (calculated)

6.846

GRAVY (calculated)

-0.186

Length

643 amino acids

Sequence
(BLAST)

001: MLPWSIFSRQ APGGDSEPEP ESEPSGRQLS DEALVEDLLT AVASARSFQE FRRSQRKESF GLQRWLQLVL PLIQEIREIG PSLTDDAYRR LALLGRAFHA
101: ARRLLRCCHD GSKIFLALES EAMLGRFRAV YEKMNLALDG MPYSEIGISD EVKEQVELIN AQLKRCKKRS DTQDMELSMD FMMILENKED GNADRAILER
201: LAKKLELQSL ADLRAETMAI KKLINERNGQ QPESTKHIIE LLNKFKEIAG IDEKNILGDV SIPKYLEKCP SLMIPNEFLC PISLEIMTDP VIIASGRTYE
301: RRSIQKWLDA GQRTCPKTQQ PLAHLSLAPN FAVKNLILQW CENNTVEIQM GESEAIAEQE DRKEDIPKLV KDLSSVHLDV QRKAAKKIRT LSKENPENRA
401: LVIENGGLPA LISLVSYPDK KIQENTVTAL LNLSIDETSK VLIAKGGALP LIIEVLRNGS VEGQENSAAT LFSLSMIDEN KAAIGVLGGI APLVALLRDG
501: TIRGKKDAAT ALFNLMLNHP NKFRAIEAGI VAALLKILNN KKLDMIDEAL SIFLLLASHP GCRSEVGTTS FVEILVQITK EGTPKNKECA LSVLLELGLH
601: NNSLMVHALG LGLQEHLSDI AKTGTSRAQR KANSLIQLSR KCL

Best Arabidopsis Sequence Match ( AT5G42340.1 )
(BLAST)

001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI

Arabidopsis Description

PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.