CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
mitochondrion 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	85.01	87.46
TraesCS2A01G475600.1	Wheat	cytosol, plasma membrane	68.63	70.91
TraesCS2D01G475600.1	Wheat	cytosol, plasma membrane	67.93	70.39
TraesCS2B01G499300.1	Wheat	plasma membrane	67.51	69.96
Os08t0415600-00	Rice	cytosol	65.97	65.69
KXG35540	Sorghum	plasma membrane	61.9	61.73
GSMUA_Achr9P14560_001	Banana	cytosol	39.36	48.03
GSMUA_Achr3P06160_001	Banana	plastid	35.01	44.09
VIT_17s0000g08080.t01	Wine grape	cytosol, mitochondrion	38.24	40.21
VIT_01s0026g00190.t01	Wine grape	cytosol	38.1	39.82
KRH03317	Soybean	cytosol, plastid	36.97	39.05
PGSC0003DMT400062931	Potato	cytosol	36.69	38.42
Solyc03g114160.1.1	Tomato	cytosol	36.55	38.27
KRH69547	Soybean	cytosol, plastid	37.82	37.87
PGSC0003DMT400082693	Potato	cytosol	12.61	36.89
PGSC0003DMT400095861	Potato	cytosol, plasma membrane	28.85	36.79
CDY55050	Canola	cytosol	35.71	36.64
Bra019924.1-P	Field mustard	mitochondrion	35.15	36.12
KRH54418	Soybean	cytosol, plastid	34.45	36.02
CDX93411	Canola	mitochondrion	35.15	35.96
CDY04344	Canola	cytosol	15.97	35.74
AT1G60190.1	Thale cress	cytosol, plastid	33.75	35.13
Solyc05g005670.1.1	Tomato	cytosol, mitochondrion	33.47	34.89
AT1G10560.1	Thale cress	cytosol	33.61	34.43
CDY24520	Canola	cytosol	32.21	34.12
CDY54132	Canola	cytosol	32.49	34.12
Bra031521.1-P	Field mustard	cytosol	32.07	33.83
CDY04342	Canola	cytosol	15.69	33.63
PGSC0003DMT400090858	Potato	cytosol, mitochondrion	21.29	33.41
EER87680	Sorghum	cytosol	24.93	29.62
OQU79384	Sorghum	cytosol	26.61	28.53
KXG33626	Sorghum	plastid	27.87	28.35
OQU78182	Sorghum	plastid	26.61	27.98
EES04812	Sorghum	plastid	28.43	27.85
EES07310	Sorghum	cytosol	22.69	25.39
KXG20946	Sorghum	cytosol	22.55	25.04
EES06804	Sorghum	cytosol	15.69	24.14
EES15482	Sorghum	cytosol	21.71	24.11
EER97464	Sorghum	cytosol	12.04	23.76
OQU92820	Sorghum	cytosol	24.79	23.63
EER97453	Sorghum	plastid	14.99	22.86
EES01872	Sorghum	cytosol	21.85	19.38
EES14396	Sorghum	cytosol	21.57	15.29

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A1Z5RAM0	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:OQU80426
ProteinID:OQU80426	ProteinID:OQU80426.1	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF116	SMART:SM00185	SMART:SM00504	EnsemblPlantsGene:SORBI_3007G126300	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI000B42610E	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:53898592..53901103

Molecular Weight (calculated)

75027.6 Da

IEP (calculated)

7.465

GRAVY (calculated)

0.146

Length

714 amino acids

Sequence
(BLAST)

001: MAPPPPRRRR MLSLPAVCPC EAIAPAPLLA SLLSLAAGVA GLPAAADVDA LPALRGAASE AVRIAGLLLA FLDGIRVPDD EAEAAPAVLV LGLSELHVAL
101: QKLRLLLADC ARKGARLWVL MNADLVASEL RVILGSVATA MDVLLPAGDV IRASPDAEEL AGLVSRHARR AAARLRPDPD DDRAARAVRS VLARFASGAT
201: PDAEDARLVL DRVGLVTWSD CAEEAAFLEA ELLDRLETGS DDDNDLVLIT GLMAFLLYCR VVLFDRIDDS GSGKVDKAAA TAGNRVTPPR FNLSVNPEAL
301: QCPITLELMT DPVTVATGQT YDRASIKKWI KSGCRTCPVT GERLRSAELV PNVAARGVIE QLLLSRGVPL HEPSSKHRYA VDKTATPFGA AAAGGVRLSA
401: AFLTARLSSG APEAQQRKAT HEARKLSKRN VFYRACLVEA GAVPWLLHLL SSMDASVQDN AVAGLLNLSK HPDGRRALVE AGGLGLIVDA VNVAAKVEAR
501: QNAAAVLFYL SSNPEYCEEI SRIPEAIPTL VRLARDGAYR GRKNALVSLY GLLQCADAHG KAVSAGAVDA LAGLMLAGRA SSTGGDDDDL AVDAVALLAR
601: LAEQPAGARA VAASSELVTR LVDFLGEAAS RSAREHCVAL LASLGRHCGD KVLALLGKLP GLTPALYALI ADGTPQAGKR ARWLVNEIHR HYEQRQTPAA
701: SAPAPATGDR VIRV

Best Arabidopsis Sequence Match ( AT1G10560.1 )
(BLAST)

001: MIHTKTGSGR RILTFPTVEP SESISIVTLL DSLIQLAGDI LTFKSKHFST NKQSFRETLR RIQNLLVVFE EIRIRIRNSR RYFHDSAAAS SLKEIHVGFQ
101: KLKFLLEDCT RDGARLCMMM NSDQVSDHLR VLTRSISTSL SAFPVASVDL TTEVNELIDL VVRQARKYGV QPETNDKRAV SSINRILALF VNRVVPDPDE
201: INRILDHVGI RKWGDCVKEI NFLGEEIDAE RLDEKKKKSS DQVELLSSLM GFICYCRCII LGRIERDDHH NHHEDGIKKD HDLIRGLKVE DLLCPISLEI
301: MTDPVVIETG HTYDRSSITK WFGSGNITCP ITGKILTSTE LVDNVSVRQV IRKHCKTNGI VLAGISRRRK SHDDVVPESL AAKGAGKLIA KFLTSELING
401: GEEMIYRAVR EIRVQTKTSS FNRSCLVKAG AVTPLLKLLS SVDIRIQENA MAGILNLSKH VTGKSKIAGE GLKILVEILN EGAKTETRLY SASALFYLSS
501: VEDYSRLIGE NPDAIPGLMN IVKGDDYGDS AKRSALLAVM GLLMQSDNHW RVLAAGAVPI LLDLLRSGEI SGGLTADCLA TLAKLAEYPD GTIGVIRRGG
601: LKLAVKILSS SEDSPVAVKQ HCVGLILNLC LNGGRDVVGV LVKNSLVMGS LYTVLSNGEY GGSKKASALI RMIHEFQERK TGSVEPNLQR GRFVHAW

Arabidopsis Description

PUB18U-box domain-containing protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIJ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.