Factsheet for HORVU5Hr1G095150.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G389800.1	Wheat	cytosol	92.45	93.46
TraesCS5B01G394800.1	Wheat	cytosol	92.72	92.97
TraesCS5D01G399700.1	Wheat	cytosol	91.91	92.16
OQU90987	Sorghum	cytosol	68.19	73.33
Zm00001d034028_P003	Maize	cytosol	71.7	71.31
GSMUA_Achr3P25620_001	Banana	cytosol	57.95	59.72
VIT_07s0005g04590.t01	Wine grape	cytosol	57.68	58.79
Os03t0750100-00	Rice	mitochondrion	52.56	55.24
Bra032529.1-P	Field mustard	cytosol	52.83	54.75
CDY10078	Canola	cytosol	53.37	54.4
KRH19640	Soybean	cytosol	52.56	54.02
AT1G04130.1	Thale cress	cytosol	52.29	53.89
KRH32256	Soybean	cytosol	51.75	53.33
CDY32528	Canola	cytosol	53.1	52.39
PGSC0003DMT400019944	Potato	cytosol	52.02	51.88
Solyc09g064380.2.1	Tomato	cytosol	15.36	44.53

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051879	EnsemblPlantsGene:HORVU5Hr1G095150	EnsemblPlants:HORVU5Hr1G095150.2	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:M0XER5	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF487	SMART:SM00028
SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000294ABE8	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:597796109..597799643

Molecular Weight (calculated)

41031.6 Da

IEP (calculated)

5.888

GRAVY (calculated)

-0.456

Length

371 amino acids

Sequence
(BLAST)

001: MALLMEPGSE PLTEGEKADL DAIAAIKESA AREYREEGNQ FVKKGRKHYP DAVDCYTKAI AQMGALSPPS PDASVLFANR AHVNLLLGNH RRALDDAEQA
101: VRLSPANLKA HYRAAKAALA LDLLPEAASF CRRGLEHDPA SEELKKFLAQ VEAQQRERDL KRAKVEQAIS AAKELAAAIE KRGLRLGKAA YQELTRVKKP
201: KLDDQGLLHW PVLLLYPEVM SSDFIEDFPE TDLFSDHLDL MFSESSPPLP WDENHAYTRE AIEMYCQAGD GTPFSKSELL KYLLEGTVDS GSLPESLDGE
301: DGERSTVKGS TAISSTGQGS SGKWIKVREG KTLQEALQHK DYIIPAVPVF FVVSRKSAFY SKFKDGKWSL P

Best Arabidopsis Sequence Match ( AT1G04130.1 )
(BLAST)

001: MALWMDAGAT PTTEKEKADL EAISALKEST AIEFKEEGNE CVRKGKKHYS EAIDCYTKAI SQGVLSDSET SILFSNRSHV NLLLGNYRRA LTDAEESMRL
101: SPHNVKAVYR AAKASMSLDL LNEAKSYCEK GIENDPSNED MKKLLKLVNS KKQEKEQHEA QASQAVVEAK ACLSAIENRG VKIGKAMYRE LTGLKKPMLD
201: KNNILHWPVL LLYAEAMTSD FVEDFCETDM FATHLDMMFS EDSPPLPWDK NNEYSRDVIE LYYEASSGTP LPRSRVLQYL LEGTKGSQAE TTGEEDTSAT
301: KTPSYLKGSS GMVKVNERRT LHDVLKEPKF VIPEIPVFYI VSKRSKFYKD FTAGKWTPPN

Arabidopsis Description

TPR2Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I456]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.