Factsheet for Os03t0750100-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90987	Sorghum	cytosol	55.52	56.81
TraesCS5B01G394800.1	Wheat	cytosol	57.22	54.59
TraesCS5A01G389800.1	Wheat	cytosol	55.81	53.68
TraesCS5D01G399700.1	Wheat	cytosol	55.52	52.97
HORVU5Hr1G095150.2	Barley	cytosol	55.24	52.56
Zm00001d034028_P003	Maize	cytosol	53.26	50.4
GSMUA_Achr3P25620_001	Banana	cytosol	39.66	38.89
VIT_07s0005g04590.t01	Wine grape	cytosol	39.09	37.91
KRH19640	Soybean	cytosol	38.24	37.4
AT1G04130.1	Thale cress	cytosol	37.39	36.67
KRH32256	Soybean	cytosol	36.26	35.56
Bra032529.1-P	Field mustard	cytosol	35.69	35.2
CDY10078	Canola	cytosol	36.26	35.16
PGSC0003DMT400019944	Potato	cytosol	36.83	34.95
CDY32528	Canola	cytosol	36.26	34.04
Solyc09g064380.2.1	Tomato	cytosol	11.33	31.25

Protein Annotations

EnsemblPlants:Os03t0750100-00	EnsemblPlantsGene:Os03g0750100	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006950	GO:GO:0008150	GO:GO:0051879	InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	ncoils:Coil
PANTHER:PTHR22904	PANTHER:PTHR22904:SF487	ProteinID:BAS86402.1	SEG:seg	SUPFAM:SSF48452	UniParc:UPI000393AD41
UniProt:A0A0P0W3Z6	MapMan:35.2	:	:	:	:

Description

Similar to TPR Domain containing protein, expressed. (Os03t0750100-00)

Coordinates

chr3:-:30904264..30909752

Molecular Weight (calculated)

38604.0 Da

IEP (calculated)

9.624

GRAVY (calculated)

-0.479

Length

353 amino acids

Sequence
(BLAST)

001: MGLVILEFGR MEFNRPMLTI RMQNLSLIAS TFHYGPARFG IAKARTPEAR GSFGSGAARR WAGEKTRAAR KEAAPSGESE RLDADGHGAA DGSRGGRPPD
101: GEREGRPGRH RRHQGVGGGR AYYRAAKAAI ALGLLPEAAA FCRRGIEQDP ANEELKKLLA QVDAQQSEQD RHRAKVAQAV SAAKDIVAAI EKRGLKLGKA
201: AYQELTGVKK PKLDEQGVLH WPVLLLYPEV MSSDFIEDFP ETDTFVPHLD AGVGTVLSKS EILKILLEGT MDSKSLPESL LDEEDGENDD GKSSTITSSD
301: KGSVKWINVK EGKTLQEVLQ HKDFIIPAIP VFFVVSRKST FYRKFKAGNW SLP

Best Arabidopsis Sequence Match ( AT1G04130.1 )
(BLAST)

001: MALWMDAGAT PTTEKEKADL EAISALKEST AIEFKEEGNE CVRKGKKHYS EAIDCYTKAI SQGVLSDSET SILFSNRSHV NLLLGNYRRA LTDAEESMRL
101: SPHNVKAVYR AAKASMSLDL LNEAKSYCEK GIENDPSNED MKKLLKLVNS KKQEKEQHEA QASQAVVEAK ACLSAIENRG VKIGKAMYRE LTGLKKPMLD
201: KNNILHWPVL LLYAEAMTSD FVEDFCETDM FATHLDMMFS EDSPPLPWDK NNEYSRDVIE LYYEASSGTP LPRSRVLQYL LEGTKGSQAE TTGEEDTSAT
301: KTPSYLKGSS GMVKVNERRT LHDVLKEPKF VIPEIPVFYI VSKRSKFYKD FTAGKWTPPN

Arabidopsis Description

TPR2Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I456]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.