Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019944 | Potato | cytosol | 87.5 | 30.11 |
| VIT_07s0005g04590.t01 | Wine grape | cytosol | 61.72 | 21.7 |
| KRH32256 | Soybean | cytosol | 49.22 | 17.5 |
| KRH19640 | Soybean | cytosol | 49.22 | 17.45 |
| Bra032529.1-P | Field mustard | cytosol | 48.44 | 17.32 |
| CDY10078 | Canola | cytosol | 48.44 | 17.03 |
| AT1G04130.1 | Thale cress | cytosol | 47.66 | 16.94 |
| GSMUA_Achr3P25620_001 | Banana | cytosol | 47.66 | 16.94 |
| TraesCS5A01G389800.1 | Wheat | cytosol | 46.09 | 16.08 |
| CDY32528 | Canola | cytosol | 46.88 | 15.96 |
| TraesCS5B01G394800.1 | Wheat | cytosol | 46.09 | 15.95 |
| TraesCS5D01G399700.1 | Wheat | cytosol | 46.09 | 15.95 |
| Zm00001d034028_P003 | Maize | cytosol | 46.09 | 15.82 |
| HORVU5Hr1G095150.2 | Barley | cytosol | 44.53 | 15.36 |
| OQU90987 | Sorghum | cytosol | 33.59 | 12.46 |
| Os03t0750100-00 | Rice | mitochondrion | 31.25 | 11.33 |
Protein Annotations
| EnsemblPlants:Solyc09g064380.2.1 | EnsemblPlantsGene:Solyc09g064380.2 | UniParc:UPI000276C127 | UniProt:K4CU68 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr9:-:61558744..61562593
Molecular Weight (calculated)
14259.7 Da
IEP (calculated)
4.715
GRAVY (calculated)
-0.378
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSEGCPPLP WDKENAYTRD AVELYYEAGA GVCLSKRDIL RYLLEGTAAS HVEDFGDEES ASAQSSTKGS ISQDVPGWVK INEKTTLYNV LKEPRCVVPG
101: LPVFWVVSRN SSFYNEFKSG NWSSPKLL
101: LPVFWVVSRN SSFYNEFKSG NWSSPKLL
001: MRLSPHNVKA VYRAAKASMS LDLLNEAKSY CEKGIENDPS NEDMKKLLKL VNSKKQEKEQ HEAQASQAVV EAKACLSAIE NRGVKIGKAM YRELTGLKKP
101: MLDKNNILHW PVLLLYAEAM TSDFVEDFCE TDMFATHLDM MFSEDSPPLP WDKNNEYSRD VIELYYEASS GTPLPRSRVL QYLLEGTKGS QAETTGEEDT
201: SATKTPSYLK GSSGMVKVNE RRTLHDVLKE PKFVIPEIPV FYIVSKRSKF YKDFTAGKWT PPN
101: MLDKNNILHW PVLLLYAEAM TSDFVEDFCE TDMFATHLDM MFSEDSPPLP WDKNNEYSRD VIELYYEASS GTPLPRSRVL QYLLEGTKGS QAETTGEEDT
201: SATKTPSYLK GSSGMVKVNE RRTLHDVLKE PKFVIPEIPV FYIVSKRSKF YKDFTAGKWT PPN
Arabidopsis Description
TPR2Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I456]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.