Factsheet for TraesCS5A01G389800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G394800.1	Wheat	cytosol	96.19	95.41
TraesCS5D01G399700.1	Wheat	cytosol	95.37	94.59
HORVU5Hr1G095150.2	Barley	cytosol	93.46	92.45
OQU90987	Sorghum	cytosol	70.3	74.78
Zm00001d034028_P003	Maize	cytosol	74.39	73.19
GSMUA_Achr3P25620_001	Banana	cytosol	58.31	59.44
VIT_07s0005g04590.t01	Wine grape	cytosol	57.22	57.69
Os03t0750100-00	Rice	mitochondrion	53.68	55.81
KRH19640	Soybean	cytosol	53.13	54.02
Bra032529.1-P	Field mustard	cytosol	52.32	53.63
AT1G04130.1	Thale cress	cytosol	52.59	53.61
KRH32256	Soybean	cytosol	52.32	53.33
CDY10078	Canola	cytosol	52.86	53.3
PGSC0003DMT400019944	Potato	cytosol	52.86	52.15
CDY32528	Canola	cytosol	52.86	51.6
Solyc09g064380.2.1	Tomato	cytosol	16.08	46.09

Protein Annotations

EnsemblPlants:TraesCS5A01G389800.1	EnsemblPlantsGene:TraesCS5A01G389800	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
ncoils:Coil	PANTHER:PTHR22904	PANTHER:PTHR22904:SF487	PFAM:PF14559	PFscan:PS50005	PFscan:PS50293
SEG:seg	SMART:SM00028	SUPFAM:SSF48452	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5A:-:585431256..585434362

Molecular Weight (calculated)

40607.1 Da

IEP (calculated)

5.844

GRAVY (calculated)

-0.474

Length

367 amino acids

Sequence
(BLAST)

001: MALLMEPGSE PLTEGEKADL DAIAAIKESA AREYREEGNQ FVKKGRKHYP DAVDCYTKAI AQMGALSAPN PDASVLFANR AHVNLLLGNH RRALDDAQQA
101: VRLSPSNLKA HYRAAKAALA LDQLPQAASF CRRGLEQDPA NEELKKFLAQ VEAQQRERDL KRAKVEQAIS AAKDLAAAIE KRGLRLGKAA YQELTGVKKP
201: KLDEQGVLHW PVLLLYPEVM SSDFIEDFPE TDMFSDHLDL MFSESSPPLP WDENHAYTRD AIELYCQAGD GTPFSKSEML KYLLEGTVDS GSLTESLDGE
301: DGEHDTVKGS TAISPSQGKW IKVREGKTLQ EALQHKDYII PAVPVFFVVS RKSAFHSKFK AGNWSLP

Best Arabidopsis Sequence Match ( AT1G04130.1 )
(BLAST)

001: MALWMDAGAT PTTEKEKADL EAISALKEST AIEFKEEGNE CVRKGKKHYS EAIDCYTKAI SQGVLSDSET SILFSNRSHV NLLLGNYRRA LTDAEESMRL
101: SPHNVKAVYR AAKASMSLDL LNEAKSYCEK GIENDPSNED MKKLLKLVNS KKQEKEQHEA QASQAVVEAK ACLSAIENRG VKIGKAMYRE LTGLKKPMLD
201: KNNILHWPVL LLYAEAMTSD FVEDFCETDM FATHLDMMFS EDSPPLPWDK NNEYSRDVIE LYYEASSGTP LPRSRVLQYL LEGTKGSQAE TTGEEDTSAT
301: KTPSYLKGSS GMVKVNERRT LHDVLKEPKF VIPEIPVFYI VSKRSKFYKD FTAGKWTPPN

Arabidopsis Description

TPR2Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I456]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.