Factsheet for HORVU1Hr1G027550.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G121600.1	Wheat	plastid	85.02	92.63
TraesCS1A01G120800.1	Wheat	plastid	84.54	92.11
TraesCS1B01G140100.1	Wheat	plastid	87.2	86.78
Os05t0182100-01	Rice	plastid	64.98	67.93
OQU77561	Sorghum	plastid	52.42	62.9
Zm00001d037616_P001	Maize	plastid	54.83	61.19
PGSC0003DMT400080145	Potato	cytosol	19.32	59.7
VIT_07s0031g01760.t01	Wine grape	cytosol	29.71	48.81
PGSC0003DMT400080166	Potato	plastid	35.27	42.32
GSMUA_Achr6P00760_001	Banana	plastid	35.02	40.62
Solyc04g051660.2.1	Tomato	plastid	33.82	40.58
KRH53808	Soybean	plastid	31.88	37.08
CDY53183	Canola	plastid	30.68	37.03
Bra033620.1-P	Field mustard	plastid	30.19	36.44
CDX72699	Canola	plastid	29.95	36.15
KRH64138	Soybean	plastid	30.68	35.67
AT4G39470.1	Thale cress	plastid	28.99	35.19

Protein Annotations

EnsemblPlants:HORVU1Hr1G027550.1	EnsemblPlantsGene:HORVU1Hr1G027550	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR26312
PANTHER:PTHR26312:SF67	PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI000B4733B4	UniProt:A0A287EZR0
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:141090122..141092829

Molecular Weight (calculated)

46952.9 Da

IEP (calculated)

4.625

GRAVY (calculated)

-0.470

Length

414 amino acids

Sequence
(BLAST)

001: MPWNNMRLKC PYSISSVPLQ SPCLVVATAP AMAMSFLSTA NTSFVPFRRL SRHKPTTTPS LPFPTNPHRS PACCLLPAER RRFSTPSSSK TPATNLLSSI
101: TAASRTLLFL LVVSILSLSV VRRPLPSLAA PPPPTQQPQD ATKGQQEEES DQGDQEEEDE AEWFRKEEEE VEAAWMQPSD EEEEEEDDDE VQMYLEVLSE
201: DPGDVDALKC VLFARMRRKD WGGALRYAAQ LREAEPGEVE WRLMEALLHE LKGDIATAER LFQEVLAEKP LLVRALHGLA LCMHKRLEGP TVFEMLEKAL
301: QLAESEERVP EERNIKLLIA QMHVVKGDLD VASEKLRTLI NEDPRDFRPH LCQGIVYALL DKKEEADEQF DVYRSLVPDE FPDKSFINDV ILSAKVESKD
401: RLQKDLRSEY LSKK

Best Arabidopsis Sequence Match ( AT4G39470.1 )
(BLAST)

001: MCSIGVTALC SPAKFHHRRE QSLIFTPTHL RNPNGFQFRW RKSRPFAPRL AQPDNFAPPL PLIRSSTSLL SSKDFVQMLA RKAAILLVGS FVFLGFCSSK
101: PALALPTATV VSQAELEDEK MFEKLLENEP ENMEAMKAVV YKKMRRGKNE DAVKYVEKLM KLEPHEVEWK LLEALCYETM GELSKAKRLY KDILKEQPLL
201: IRALHGLAMV MHKTHDTSVF DMLIEAMEVA RQGNRVTEER NIQVLIGQMH IVEGQFEEGL KIFQQMVNDN PRDFRPYLCQ GIVYSLMDKK EEAAQQFEIY
301: WSLVPGEFPQ KGFLDDVALA AQAKSRERLQ NTFKAKFTQG R

Arabidopsis Description

AT4g39470/F23K16_100 [Source:UniProtKB/TrEMBL;Acc:Q94A56]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.