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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400080145 Potato cytosol 40.08 75.37
PGSC0003DMT400080166 Potato plastid 65.87 48.12
Solyc04g051660.2.1 Tomato plastid 65.87 48.12
KRH64138 Soybean plastid 67.06 47.47
KRH53808 Soybean plastid 66.67 47.19
AT4G39470.1 Thale cress plastid 59.52 43.99
CDX72699 Canola plastid 59.13 43.44
CDY53183 Canola plastid 58.73 43.15
Bra033620.1-P Field mustard plastid 57.94 42.57
GSMUA_Achr6P00760_001 Banana plastid 56.75 40.06
OQU77561 Sorghum plastid 49.21 35.94
TraesCS1D01G121600.1 Wheat plastid 49.6 32.89
TraesCS1A01G120800.1 Wheat plastid 49.21 32.63
Zm00001d037616_P001 Maize plastid 48.02 32.61
Os05t0182100-01 Rice plastid 49.6 31.57
TraesCS1B01G140100.1 Wheat plastid 50.0 30.29
HORVU1Hr1G027550.1 Barley plastid 48.81 29.71
VIT_01s0010g01810.t01 Wine grape plastid 33.33 26.92
VIT_08s0040g02670.t01 Wine grape plastid 34.92 24.38
Protein Annotations
Gene3D:1.25.40.10EntrezGene:100254208wikigene:100254208MapMan:35.1ProteinID:CBI21527ProteinID:CBI21527.3
UniProt:D7SW78EMBL:FN595233GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR011990
InterPro:IPR013026EntrezGene:LOC100254208wikigene:LOC100254208PFscan:PS50293PANTHER:PTHR26312PANTHER:PTHR26312:SF67
SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfUniParc:UPI0001BE1FCDArrayExpress:VIT_07s0031g01760EnsemblPlantsGene:VIT_07s0031g01760
EnsemblPlants:VIT_07s0031g01760.t01RefSeq:XP_002275767RefSeq:XP_002275767.1SEG:seg::
Description
No Description!
Coordinates
chr7:+:17850176..17854507
Molecular Weight (calculated)
29544.6 Da
IEP (calculated)
7.037
GRAVY (calculated)
-0.627
Length
252 amino acids
Sequence
(BLAST)
001: MALPAHMGRY SSNVEQKRDA QDSESEHDDM YAKILEKDPR NVEALKVVLY GKMRRGKTKE AVEYVERLID IEPDEVEWRL LQALSYEIMG HLSKAKRLFK
101: EILKERPLLL RALHGLALVM HKNHEGPDAV FEMLNNALEV ARHQKRVTEE RSIRILIAQM HVVQGDLEEG LKKFQDLVDE NPRDFRPYLC QGIIYSLLDK
201: KKEAQEQFEI YRTLVPEEFP QRGFLNDVVS AAKAKSRERF HKEFQAEFSN IR
Best Arabidopsis Sequence Match ( AT4G39470.1 )
(BLAST)
001: MCSIGVTALC SPAKFHHRRE QSLIFTPTHL RNPNGFQFRW RKSRPFAPRL AQPDNFAPPL PLIRSSTSLL SSKDFVQMLA RKAAILLVGS FVFLGFCSSK
101: PALALPTATV VSQAELEDEK MFEKLLENEP ENMEAMKAVV YKKMRRGKNE DAVKYVEKLM KLEPHEVEWK LLEALCYETM GELSKAKRLY KDILKEQPLL
201: IRALHGLAMV MHKTHDTSVF DMLIEAMEVA RQGNRVTEER NIQVLIGQMH IVEGQFEEGL KIFQQMVNDN PRDFRPYLCQ GIVYSLMDKK EEAAQQFEIY
301: WSLVPGEFPQ KGFLDDVALA AQAKSRERLQ NTFKAKFTQG R
Arabidopsis Description
AT4g39470/F23K16_100 [Source:UniProtKB/TrEMBL;Acc:Q94A56]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.