Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53183 | Canola | plastid | 81.82 | 81.34 |
| CDX72699 | Canola | plastid | 81.52 | 81.05 |
| Bra033620.1-P | Field mustard | plastid | 81.23 | 80.76 |
| PGSC0003DMT400080145 | Potato | cytosol | 24.34 | 61.94 |
| VIT_07s0031g01760.t01 | Wine grape | cytosol | 43.99 | 59.52 |
| PGSC0003DMT400080166 | Potato | plastid | 46.33 | 45.8 |
| Solyc04g051660.2.1 | Tomato | plastid | 46.04 | 45.51 |
| KRH64138 | Soybean | plastid | 47.51 | 45.51 |
| KRH53808 | Soybean | plastid | 46.63 | 44.66 |
| GSMUA_Achr6P00760_001 | Banana | plastid | 41.35 | 39.5 |
| OQU77561 | Sorghum | plastid | 35.48 | 35.07 |
| TraesCS1D01G121600.1 | Wheat | plastid | 36.36 | 32.63 |
| Os05t0182100-01 | Rice | plastid | 37.54 | 32.32 |
| TraesCS1A01G120800.1 | Wheat | plastid | 35.48 | 31.84 |
| Zm00001d037616_P001 | Maize | plastid | 34.31 | 31.54 |
| TraesCS1B01G140100.1 | Wheat | plastid | 36.36 | 29.81 |
| HORVU1Hr1G027550.1 | Barley | plastid | 35.19 | 28.99 |
| AT2G37400.1 | Thale cress | plastid | 24.93 | 25.53 |
| AT3G18420.1 | Thale cress | plastid | 22.87 | 24.68 |
| AT5G02590.1 | Thale cress | cytosol | 23.46 | 24.54 |
| AT3G53560.2 | Thale cress | plastid | 25.81 | 22.68 |
| AT3G09490.1 | Thale cress | plastid | 19.94 | 20.36 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:830102 | UniProt:A0A178UTJ0 | ProteinID:AEE87076.1 | ArrayExpress:AT4G39470 |
| EnsemblPlantsGene:AT4G39470 | RefSeq:AT4G39470 | TAIR:AT4G39470 | RefSeq:AT4G39470-TAIR-G | EnsemblPlants:AT4G39470.1 | TAIR:AT4G39470.1 |
| EMBL:AY050356 | EMBL:BT004514 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | RefSeq:NP_568061.1 | ProteinID:OAO97188.1 | PFAM:PF14559 |
| PO:PO:0000293 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR26312 | PANTHER:PTHR26312:SF67 | UniProt:Q94A56 |
| SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000000C383 | : |
Description
AT4g39470/F23K16_100 [Source:UniProtKB/TrEMBL;Acc:Q94A56]
Coordinates
chr4:-:18359198..18361182
Molecular Weight (calculated)
39157.8 Da
IEP (calculated)
9.119
GRAVY (calculated)
-0.318
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSIGVTALC SPAKFHHRRE QSLIFTPTHL RNPNGFQFRW RKSRPFAPRL AQPDNFAPPL PLIRSSTSLL SSKDFVQMLA RKAAILLVGS FVFLGFCSSK
101: PALALPTATV VSQAELEDEK MFEKLLENEP ENMEAMKAVV YKKMRRGKNE DAVKYVEKLM KLEPHEVEWK LLEALCYETM GELSKAKRLY KDILKEQPLL
201: IRALHGLAMV MHKTHDTSVF DMLIEAMEVA RQGNRVTEER NIQVLIGQMH IVEGQFEEGL KIFQQMVNDN PRDFRPYLCQ GIVYSLMDKK EEAAQQFEIY
301: WSLVPGEFPQ KGFLDDVALA AQAKSRERLQ NTFKAKFTQG R
101: PALALPTATV VSQAELEDEK MFEKLLENEP ENMEAMKAVV YKKMRRGKNE DAVKYVEKLM KLEPHEVEWK LLEALCYETM GELSKAKRLY KDILKEQPLL
201: IRALHGLAMV MHKTHDTSVF DMLIEAMEVA RQGNRVTEER NIQVLIGQMH IVEGQFEEGL KIFQQMVNDN PRDFRPYLCQ GIVYSLMDKK EEAAQQFEIY
301: WSLVPGEFPQ KGFLDDVALA AQAKSRERLQ NTFKAKFTQG R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.