Factsheet for AT5G02590.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005759.1-P	Field mustard	plastid	72.09	75.08
CDY11220	Canola	plastid	71.78	74.76
CDX80831	Canola	cytosol, plastid	67.18	69.97
KRH57052	Soybean	cytosol	32.21	47.95
AT2G37400.1	Thale cress	plastid	46.01	45.05
Solyc09g005740.1.1	Tomato	plastid	44.48	40.96
AT3G53560.2	Thale cress	plastid	47.55	39.95
GSMUA_Achr7P15300_001	Banana	mitochondrion, plastid	42.33	39.88
PGSC0003DMT400061430	Potato	plastid	42.02	39.14
PGSC0003DMT400028724	Potato	plastid	41.1	38.95
KRH19745	Soybean	plastid	38.96	38.6
KRH67571	Soybean	plastid	38.04	37.8
VIT_08s0040g02670.t01	Wine grape	plastid	41.72	37.67
KRG95856	Soybean	plastid	40.49	37.61
AT3G09490.1	Thale cress	plastid	37.12	36.23
PGSC0003DMT400091279	Potato	plastid	34.05	35.81
Solyc10g085900.1.1	Tomato	plastid	32.82	34.97
AT3G18420.1	Thale cress	plastid	25.77	26.58
AT4G39470.1	Thale cress	plastid	24.54	23.46

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:831857	UniProt:A0A178ULS4	ProteinID:AED90494.1	ArrayExpress:AT5G02590
EnsemblPlantsGene:AT5G02590	RefSeq:AT5G02590	TAIR:AT5G02590	RefSeq:AT5G02590-TAIR-G	EnsemblPlants:AT5G02590.1	TAIR:AT5G02590.1
EMBL:AY085220	Unigene:At.33398	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	RefSeq:NP_568104.1	ProteinID:OAO94976.1	PFAM:PF14559	PO:PO:0000013	PO:PO:0000037
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR26312	PANTHER:PTHR26312:SF76
UniProt:Q8LEV0	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI000009C649	SEG:seg	:	:	:	:

Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LEV0]

Coordinates

chr5:+:583050..584179

Molecular Weight (calculated)

37264.7 Da

IEP (calculated)

8.560

GRAVY (calculated)

-0.567

Length

326 amino acids

Sequence
(BLAST)

001: MVSLAKFHYC DQTLHLRLDT HRKPQPKPVS YRILHKPPPS RVIRASSFSS NPKPSFLKTT CVTLTTAAAL LSASLHLSTK PVTAATLVSP PPPPSTAADL
101: TSDQISSRPK EEEEEAALEK HLTKNPNDVE ALQSLMKIKF QTKNIDHALE ILNRLIEIQP EEQEWRILKA QVQTYGGDFD SATKGFEEVL SKDPFRVEAY
201: HGLVMAYSES ESKLSEIESR INEAIEKCKK ENKKDFRDFM LLIAQIRVIK GNPIEALRVY QELVKDEPKD FRPYLCQGLI YTLMKKKDEA EKQFAEFRRL
301: VPENHPYKEY LDANVLNTNK LFAKNQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.