Factsheet for GSMUA_Achr7P15300_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017190.1-P	Field mustard	cytosol	33.81	59.09
AT2G37400.1	Thale cress	plastid	48.84	50.75
CDX93382	Canola	plastid	47.4	50.15
KRH57052	Soybean	cytosol	31.21	49.32
CDY18448	Canola	plastid	45.95	48.77
VIT_08s0040g02670.t01	Wine grape	plastid	50.87	48.75
CDY46775	Canola	plastid	46.24	48.48
Bra023116.1-P	Field mustard	plastid	46.24	47.9
PGSC0003DMT400061430	Potato	plastid	46.53	46.0
Bra005759.1-P	Field mustard	plastid	41.33	45.69
CDY11220	Canola	plastid	41.04	45.37
Solyc09g005740.1.1	Tomato	plastid	45.95	44.92
KRG95856	Soybean	plastid	45.38	44.73
PGSC0003DMT400028724	Potato	plastid	42.77	43.02
KRH67571	Soybean	plastid	40.75	42.99
AT5G02590.1	Thale cress	cytosol	39.88	42.33
CDX80831	Canola	cytosol, plastid	37.86	41.85
AT3G53560.2	Thale cress	plastid	45.95	40.98
KRH19745	Soybean	plastid	37.28	39.21
Bra007011.1-P	Field mustard	plastid	35.84	38.39
CDX78187	Canola	plastid	35.26	38.12
Solyc10g085900.1.1	Tomato	plastid	32.95	37.25
PGSC0003DMT400091279	Potato	plastid	32.66	36.45
CDX73544	Canola	plastid	23.99	32.81
AT3G09490.1	Thale cress	plastid	30.06	31.14
GSMUA_Achr6P00760_001	Banana	plastid	29.48	28.57

Protein Annotations

EnsemblPlants:GSMUA_Achr7P15300_001	EnsemblPlants:GSMUA_Achr7T15300_001	EnsemblPlantsGene:GSMUA_Achr7G15300_001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	ncoils:Coil
PANTHER:PTHR26312	PANTHER:PTHR26312:SF76	PFscan:PS50293	SEG:seg	SUPFAM:SSF48452	UniParc:UPI000294D56D
UniProt:M0THR7	MapMan:35.1	:	:	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G15300_001]

Coordinates

chr7:+:12246782..12248111

Molecular Weight (calculated)

38443.4 Da

IEP (calculated)

7.791

GRAVY (calculated)

-0.341

Length

346 amino acids

Sequence
(BLAST)

001: MEPLCRTAHR HPFHLPLFSK PLLSSPPLLK PFPCSSSSTK PCPSLRASCS SKSSSNSLAP VIKIASVAAA TSIAAAALFL ARLCPPALAA AAAAAPPAPA
101: VQSDALPSDA SSETTPLTEA EKERILEERL DSHPDDVRSL RALMELKVKA GKLAEAIGIV DRLIALEPAE KDLPLLKAHL QSYDGNTETA KRGFEELLEK
201: DPFLVEAYHG LIMATSQSED DGDLDAILKR VEDAMELCKK ARRKEDLRDF KLLMAQIRVI EGRYEDSLKI YKELVKEEPR DFRPYLCQGI IYTLLRKKDE
301: AEKQFQTYRR LVPKGHPYAQ YFDDNMIAMK VFGQMDENRR KAALKN

Best Arabidopsis Sequence Match ( AT2G37400.1 )
(BLAST)

001: MESLGKLQLH QQPNHLSFTH FSSSFPKKPS SFSLRSLPRS TSSFKCISIK ASSSKSQDSK LSILKSTCVS FTAAAALFLV NLQLKPSPAI AAPVAATPLM
101: ESLKQSNGNV SFEEEERSLE EYLASHPDDV EALRSLMEVR IKSRKLLEAI ELIDRLIELE PEEKEWPMLK ANIFSYSGDL ESAKTGFEEI LVKDPLRVEA
201: YHGLVMAYSD SGDDLNAVEK RIEEAMVRCK KEKNRKDLRD FKLLVAQIRV IEGKHNEALK LYEELVKEEP RDFRPYLCQG IIYTVLKKEN EAEKQFEKFR
301: RLVPKNHPYR EYFMDNMVAS KLFAEKVQRE MAE

Arabidopsis Description

At2g37400 [Source:UniProtKB/TrEMBL;Acc:Q9ZUS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.