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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017190.1-P Field mustard cytosol 49.85 83.84
CDY46775 Canola plastid 72.67 73.33
CDX93382 Canola plastid 71.47 72.78
Bra023116.1-P Field mustard plastid 72.67 72.46
CDY18448 Canola plastid 69.97 71.47
AT3G53560.2 Thale cress plastid 66.97 57.47
KRH57052 Soybean cytosol 35.14 53.42
VIT_08s0040g02670.t01 Wine grape plastid 56.46 52.08
GSMUA_Achr7P15300_001 Banana mitochondrion, plastid 50.75 48.84
KRG95856 Soybean plastid 49.25 46.72
KRH67571 Soybean plastid 45.65 46.34
PGSC0003DMT400061430 Potato plastid 48.65 46.29
AT5G02590.1 Thale cress cytosol 45.05 46.01
Solyc09g005740.1.1 Tomato plastid 47.75 44.92
PGSC0003DMT400028724 Potato plastid 45.35 43.9
PGSC0003DMT400091279 Potato plastid 39.34 42.26
Solyc10g085900.1.1 Tomato plastid 38.74 42.16
KRH19745 Soybean plastid 39.94 40.43
AT3G09490.1 Thale cress plastid 39.04 38.92
AT3G18420.1 Thale cress plastid 29.13 30.7
AT4G39470.1 Thale cress plastid 25.53 24.93
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1EntrezGene:818316ProteinID:AAC98059.1ProteinID:AEC09393.1ArrayExpress:AT2G37400
EnsemblPlantsGene:AT2G37400RefSeq:AT2G37400TAIR:AT2G37400RefSeq:AT2G37400-TAIR-GEnsemblPlants:AT2G37400.1TAIR:AT2G37400.1
EMBL:BT028932ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0009536GO:GO:0009941
InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734RefSeq:NP_565860.1PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0005052PO:PO:0007064PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PFscan:PS50005PFscan:PS50293PANTHER:PTHR26312PANTHER:PTHR26312:SF76
UniProt:Q9ZUS6SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatUniParc:UPI00000A63C4
SEG:seg:::::
Description
At2g37400 [Source:UniProtKB/TrEMBL;Acc:Q9ZUS6]
Coordinates
chr2:-:15695988..15697457
Molecular Weight (calculated)
38157.9 Da
IEP (calculated)
7.184
GRAVY (calculated)
-0.463
Length
333 amino acids
Sequence
(BLAST)
001: MESLGKLQLH QQPNHLSFTH FSSSFPKKPS SFSLRSLPRS TSSFKCISIK ASSSKSQDSK LSILKSTCVS FTAAAALFLV NLQLKPSPAI AAPVAATPLM
101: ESLKQSNGNV SFEEEERSLE EYLASHPDDV EALRSLMEVR IKSRKLLEAI ELIDRLIELE PEEKEWPMLK ANIFSYSGDL ESAKTGFEEI LVKDPLRVEA
201: YHGLVMAYSD SGDDLNAVEK RIEEAMVRCK KEKNRKDLRD FKLLVAQIRV IEGKHNEALK LYEELVKEEP RDFRPYLCQG IIYTVLKKEN EAEKQFEKFR
301: RLVPKNHPYR EYFMDNMVAS KLFAEKVQRE MAE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.