CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023116.1-P	Field mustard	plastid	98.18	97.01
AT2G37400.1	Thale cress	plastid	73.33	72.67
CDX93382	Canola	plastid	70.91	71.56
CDY18448	Canola	plastid	69.7	70.55
CDY11220	Canola	plastid	50.61	53.35
CDX80831	Canola	cytosol, plastid	49.09	51.76
KRH57052	Soybean	cytosol	33.64	50.68
CDX78187	Canola	plastid	49.09	50.62
PGSC0003DMT400061430	Potato	plastid	53.33	50.29
KRH67571	Soybean	plastid	48.18	48.48
Solyc09g005740.1.1	Tomato	plastid	51.82	48.31
VIT_08s0040g02670.t01	Wine grape	plastid	52.73	48.2
KRG95856	Soybean	plastid	49.7	46.72
GSMUA_Achr7P15300_001	Banana	mitochondrion, plastid	48.48	46.24
PGSC0003DMT400028724	Potato	plastid	46.06	44.19
CDX95523	Canola	cytosol	10.3	43.04
CDX73544	Canola	plastid	32.42	42.29
PGSC0003DMT400091279	Potato	plastid	39.09	41.61
Solyc10g085900.1.1	Tomato	plastid	38.18	41.18
KRH19745	Soybean	plastid	40.61	40.73
CDY53407	Canola	cytosol, nucleus, plastid	16.67	33.33
CDY54811	Canola	plastid	29.09	30.09
CDX92326	Canola	plastid	29.09	30.09
CDX92236	Canola	plastid	28.79	29.78
CDX72699	Canola	plastid	28.48	27.41
CDY53183	Canola	plastid	28.18	27.11
CDY53406	Canola	plasma membrane	5.76	8.33

Protein Annotations

EnsemblPlants:CDY46775	EnsemblPlantsGene:GSBRNA2T00086103001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR26312
PANTHER:PTHR26312:SF76	PFAM:PF13432	PFscan:PS50293	ProteinID:CDY46775	ProteinID:CDY46775.1	SEG:seg
SUPFAM:SSF48452	UniParc:UPI0004EDD16E	UniProt:A0A078I798	MapMan:35.1	:	:

Description

BnaA03g17190DBnaA03g17190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I798]

Coordinates

chrLK032684:-:182306..183599

Molecular Weight (calculated)

37513.2 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.481

Length

330 amino acids

Sequence
(BLAST)

001: MASLGKLQPI QLSLSQFSSS LPQNRSSLSF RSSRRSTPSF KCASSSKPQV LQSLPSRLLK STCITFTAAA ALLFANLHLK PPPPAIATPL PTTSAMESLK
101: QSNDSLEEEE RSLEEHLASH PEDVAALRSL MEVKIKSRKL LEAIEIINRL IELEPEEKEW PILKANIFTH SGDLESAKSV FEEILAKDPL RVEAYHGLAM
201: AYSESGDDLN VIEKRIHESM ERCKKEKNVK DLRDFKLLVA QIRVIEGKHE EALKLYQELV KEEPRDFRPY LCQGIIYTLL KKGDEAEKQF EKFRKLVPRN
301: HPYREYFMDN MVATKLFAEK AQRETAGSKS

Best Arabidopsis Sequence Match ( AT2G37400.1 )
(BLAST)

001: MESLGKLQLH QQPNHLSFTH FSSSFPKKPS SFSLRSLPRS TSSFKCISIK ASSSKSQDSK LSILKSTCVS FTAAAALFLV NLQLKPSPAI AAPVAATPLM
101: ESLKQSNGNV SFEEEERSLE EYLASHPDDV EALRSLMEVR IKSRKLLEAI ELIDRLIELE PEEKEWPMLK ANIFSYSGDL ESAKTGFEEI LVKDPLRVEA
201: YHGLVMAYSD SGDDLNAVEK RIEEAMVRCK KEKNRKDLRD FKLLVAQIRV IEGKHNEALK LYEELVKEEP RDFRPYLCQG IIYTVLKKEN EAEKQFEKFR
301: RLVPKNHPYR EYFMDNMVAS KLFAEKVQRE MAE

Arabidopsis Description

At2g37400 [Source:UniProtKB/TrEMBL;Acc:Q9ZUS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.