Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G120800.1 | Wheat | plastid | 96.05 | 96.05 |
| TraesCS1B01G140100.1 | Wheat | plastid | 95.53 | 87.26 |
| HORVU1Hr1G027550.1 | Barley | plastid | 92.63 | 85.02 |
| Os05t0182100-01 | Rice | plastid | 68.95 | 66.16 |
| OQU77561 | Sorghum | plastid | 56.32 | 62.03 |
| Zm00001d037616_P001 | Maize | plastid | 60.26 | 61.73 |
| PGSC0003DMT400080145 | Potato | cytosol | 21.32 | 60.45 |
| VIT_07s0031g01760.t01 | Wine grape | cytosol | 32.89 | 49.6 |
| PGSC0003DMT400080166 | Potato | plastid | 38.68 | 42.61 |
| Solyc04g051660.2.1 | Tomato | plastid | 37.37 | 41.16 |
| GSMUA_Achr6P00760_001 | Banana | plastid | 37.89 | 40.34 |
| CDY53183 | Canola | plastid | 33.68 | 37.32 |
| CDX72699 | Canola | plastid | 33.42 | 37.03 |
| Bra033620.1-P | Field mustard | plastid | 33.16 | 36.73 |
| KRH53808 | Soybean | plastid | 34.21 | 36.52 |
| AT4G39470.1 | Thale cress | plastid | 32.63 | 36.36 |
| KRH64138 | Soybean | plastid | 33.68 | 35.96 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G121600.1 | EnsemblPlantsGene:TraesCS1D01G121600 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | ncoils:Coil | PANTHER:PTHR26312 |
| PANTHER:PTHR26312:SF67 | PFscan:PS50293 | SEG:seg | SUPFAM:SSF48452 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:-:121397484..121404481
Molecular Weight (calculated)
43319.4 Da
IEP (calculated)
4.578
GRAVY (calculated)
-0.568
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMSFLSTAN ASFVPFRRLS RHKPTATPSL QFPTNRRRSP SCSLLPPQHR RLSSSKAPTT NLLSSITAAS RTLLFLLVAS ILSLSGVRRP LPSLAAPPPP
101: TQQPQDDTKG QQEEEPDQGD QEEEDEAEWF RKEEEEVEAA WMQPSDEEEE EEDDDEVQMY LEVLSEDPGD VDALKCVLFA RMRRKDWGGA LRYAAQLREA
201: EPGEVEWRLM EALLHELNGD IATAERLFQE VLAEKPLLVR ALHGLALCMH KRLEGPTVFE MLEKALQLAV SEERVPEERN IKLLIAQMHV VKGDLDLASE
301: KLRTLINEDP RDFRPHLCQG IVYALLDKKE EADEQFDVYR SLVPDEFPDK SFINDVILSA KVESKDRLQK DFRSEYLSKK
101: TQQPQDDTKG QQEEEPDQGD QEEEDEAEWF RKEEEEVEAA WMQPSDEEEE EEDDDEVQMY LEVLSEDPGD VDALKCVLFA RMRRKDWGGA LRYAAQLREA
201: EPGEVEWRLM EALLHELNGD IATAERLFQE VLAEKPLLVR ALHGLALCMH KRLEGPTVFE MLEKALQLAV SEERVPEERN IKLLIAQMHV VKGDLDLASE
301: KLRTLINEDP RDFRPHLCQG IVYALLDKKE EADEQFDVYR SLVPDEFPDK SFINDVILSA KVESKDRLQK DFRSEYLSKK
001: MCSIGVTALC SPAKFHHRRE QSLIFTPTHL RNPNGFQFRW RKSRPFAPRL AQPDNFAPPL PLIRSSTSLL SSKDFVQMLA RKAAILLVGS FVFLGFCSSK
101: PALALPTATV VSQAELEDEK MFEKLLENEP ENMEAMKAVV YKKMRRGKNE DAVKYVEKLM KLEPHEVEWK LLEALCYETM GELSKAKRLY KDILKEQPLL
201: IRALHGLAMV MHKTHDTSVF DMLIEAMEVA RQGNRVTEER NIQVLIGQMH IVEGQFEEGL KIFQQMVNDN PRDFRPYLCQ GIVYSLMDKK EEAAQQFEIY
301: WSLVPGEFPQ KGFLDDVALA AQAKSRERLQ NTFKAKFTQG R
101: PALALPTATV VSQAELEDEK MFEKLLENEP ENMEAMKAVV YKKMRRGKNE DAVKYVEKLM KLEPHEVEWK LLEALCYETM GELSKAKRLY KDILKEQPLL
201: IRALHGLAMV MHKTHDTSVF DMLIEAMEVA RQGNRVTEER NIQVLIGQMH IVEGQFEEGL KIFQQMVNDN PRDFRPYLCQ GIVYSLMDKK EEAAQQFEIY
301: WSLVPGEFPQ KGFLDDVALA AQAKSRERLQ NTFKAKFTQG R
Arabidopsis Description
AT4g39470/F23K16_100 [Source:UniProtKB/TrEMBL;Acc:Q94A56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.