Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88892 | Sorghum | cytosol | 66.18 | 68.74 |
| Zm00001d014640_P035 | Maize | cytosol | 65.38 | 67.21 |
| TraesCS3D01G362300.2 | Wheat | nucleus | 64.48 | 65.52 |
| TraesCS3B01G401200.2 | Wheat | nucleus | 64.14 | 65.17 |
| TraesCS3A01G369300.2 | Wheat | nucleus | 63.35 | 64.37 |
| Zm00001d036507_P003 | Maize | cytosol | 63.12 | 64.06 |
| TraesCS6B01G274100.2 | Wheat | nucleus | 63.24 | 63.81 |
| TraesCS6D01G233000.5 | Wheat | nucleus | 63.01 | 63.58 |
| TraesCS6A01G251200.2 | Wheat | nucleus | 62.9 | 63.47 |
| HORVU0Hr1G018210.6 | Barley | nucleus | 61.09 | 61.86 |
| GSMUA_Achr4P26970_001 | Banana | nucleus | 25.11 | 58.12 |
| GSMUA_Achr1P01610_001 | Banana | nucleus | 53.17 | 53.35 |
| VIT_15s0021g02140.t01 | Wine grape | nucleus | 48.3 | 48.63 |
| GSMUA_Achr4P26960_001 | Banana | nucleus | 27.83 | 48.62 |
| KRH30315 | Soybean | nucleus | 45.36 | 45.62 |
| KRH75261 | Soybean | nucleus | 44.68 | 44.89 |
| Solyc11g013370.1.1 | Tomato | nucleus | 42.87 | 44.75 |
| AT2G44950.1 | Thale cress | nucleus | 42.31 | 42.6 |
| Bra040332.1-P | Field mustard | nucleus | 41.4 | 41.64 |
| CDY18962 | Canola | nucleus | 41.06 | 41.58 |
| CDX74700 | Canola | nucleus | 41.4 | 41.54 |
| CDY37020 | Canola | nucleus | 41.18 | 41.51 |
| CDY27400 | Canola | nucleus | 40.72 | 41.24 |
| Bra004879.1-P | Field mustard | nucleus | 41.18 | 40.27 |
| Os10t0565600-01 | Rice | nucleus | 29.75 | 31.16 |
Protein Annotations
Description
HISTONE MONOUBIQUITINATION1, HISTONE MONOUBIQUITINATION 1E3 ligases of H2Bub1, Transcriptional regulation of anther development (Os04t0550400-01)
Coordinates
chr4:-:27551423..27560074
Molecular Weight (calculated)
100378.0 Da
IEP (calculated)
7.901
GRAVY (calculated)
-0.730
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTGEPDRK RRLSSSVAPG GGAPVSPAKR LAVAPTSEDK KLDFTVLKYK NQKLSEQLEA HKFEYRALEN KFAGLKEKQR THNETLSLVN SSWEQLVADL
101: KSRSFCKSGS PNSSPGSGHN NVQKDGTCAP IERDTLRSLV ESGATESSGC LPGCHLGSDA PPLHLSTANA LGDIFFPSSD LLQANEECAL AALTKLPEND
201: RSKQLQSTSS NLLSSLNNVV QALSNLQLKH KQLAEDYQNQ RDSSARKRAE HRRLKEELAS AASELEETNY KLAALKAQRD NTQGARIPYP TLGNKNMPED
301: KVRDKQREMQ DLEATHKELS ELISKRLVEI KRLHEERIEI LNKIATFQNI LMDFKSIRSS KAFQLVNDRL QKSQAELDHY QTLLEKLQVD KDKFVWQERQ
401: FNLKVDLAEI PERVSTYCES SIADLKKDIQ KLCDEKNMLI LKLEEASREP GRNQVITKFK ALVSSIPREM GAMQSEMTKH KEASLELNSL RAEVHSLSRI
501: LSRKERDNEE ASCRSARAGS DITQLQSVIS DLKQTNKELK LFADMYKRES TDSREIMESR DREFLEWAHV HALKSSLDES KLEQRVKAAN EAEAITQQRL
601: ATAEAEIAES GQKLGTSRKD LVSLSHMLKS KQEECEAYRV EVECIGQAYE DIQAQNQQLL QQIIERDDDN TKIFMEGVKA KQTQDALHLE TYSLRRNLQQ
701: ESSLMDLYNQ KIVSLEDQLK MWSDRVGKLQ EDGWQQSVSL SNYQRKLVDV HRDAQKLMQS LDGIQANVGS SRLEVADLLI ELEKERFSKK RIEDDLEVMS
801: RKASSLRAKA RESAVLEKLR HEVKEYRGIL KCGICHDRQK EVVITKCYHL FCNQCIQKSL GNRQRRCPSC SLSFGANDVK PIYI
101: KSRSFCKSGS PNSSPGSGHN NVQKDGTCAP IERDTLRSLV ESGATESSGC LPGCHLGSDA PPLHLSTANA LGDIFFPSSD LLQANEECAL AALTKLPEND
201: RSKQLQSTSS NLLSSLNNVV QALSNLQLKH KQLAEDYQNQ RDSSARKRAE HRRLKEELAS AASELEETNY KLAALKAQRD NTQGARIPYP TLGNKNMPED
301: KVRDKQREMQ DLEATHKELS ELISKRLVEI KRLHEERIEI LNKIATFQNI LMDFKSIRSS KAFQLVNDRL QKSQAELDHY QTLLEKLQVD KDKFVWQERQ
401: FNLKVDLAEI PERVSTYCES SIADLKKDIQ KLCDEKNMLI LKLEEASREP GRNQVITKFK ALVSSIPREM GAMQSEMTKH KEASLELNSL RAEVHSLSRI
501: LSRKERDNEE ASCRSARAGS DITQLQSVIS DLKQTNKELK LFADMYKRES TDSREIMESR DREFLEWAHV HALKSSLDES KLEQRVKAAN EAEAITQQRL
601: ATAEAEIAES GQKLGTSRKD LVSLSHMLKS KQEECEAYRV EVECIGQAYE DIQAQNQQLL QQIIERDDDN TKIFMEGVKA KQTQDALHLE TYSLRRNLQQ
701: ESSLMDLYNQ KIVSLEDQLK MWSDRVGKLQ EDGWQQSVSL SNYQRKLVDV HRDAQKLMQS LDGIQANVGS SRLEVADLLI ELEKERFSKK RIEDDLEVMS
801: RKASSLRAKA RESAVLEKLR HEVKEYRGIL KCGICHDRQK EVVITKCYHL FCNQCIQKSL GNRQRRCPSC SLSFGANDVK PIYI
001: MASTGEPDRK RRHFSSISPS EAAAAVKKQP FFWPSSEDKL DTAVLQFQNL KLSQKLEAQQ VECSILEDKL SQIKEKQLPY NSSLKTVHKS WEKLTASVES
101: CSVRVSDSSS GAHRFVNKED GSSPAVKNDF INRLLETGAT ESSSSNICSN QMEENGVNTS SQMTQTLYNL VAATEDLRCL KDELYPTVLR TNLGKDLCGQ
201: LALSELESEI KSFRGDLDDV LVKFKSLSRE LQSHRDADAK VRVDLKRIRG ELEDEVVELQ QCNGDLSALR AERDATAGAF FPVLSLGNKL ATSDRERDKQ
301: RDLQDMETVL KELTVLASGR LQQLKNLHEE RTKMLGKMSN LQNKSKSVRC ISSSQACLSL KDQLEKSKEA VFQYMALLEK LQVEKDSIVW KEREINIKNE
401: LGDVSRKTSA VTDSRMASLD SEIQKQLDEK MRIKTRLGNI SRERGRKEIF ADMKALISSF PEEMSSMRSQ LNNYKETAGG IHSLRADVQS LSGVLCRKTK
501: EYEALQLRSA DYASQLGDLN ATVCDLKNSH EELKLFLDMY KRESTDARDI AEAKEQEYRA WAHVQSLKSS LDEQNLELRV KAANEAEAVS QQMLAAAEAE
601: IADLRQKMDD CKRDVAKHSD ILKSKHEEHG TYLSEIQTIG SAYEDIVPQN QQLLLQVTER DDYNIKLFLE GITSRQMQDT LLIDKYIMDK DIQQGSAYAS
701: FLSKKSSRIE DQLRFCTDQF QKLAEDKYQK SVSLENLQKK RADIGNGLEQ ARSRLEESHS KVEQSRLDYG ALELELEIER FNRRRIEEEM EIAKKKVSRL
801: RSLIEGSSAI QKLRQELSEF KEILKCKACN DRPKEVVITK CYHLFCNPCV QKLTGTRQKK CPTCSASFGP NDIKPIYI
101: CSVRVSDSSS GAHRFVNKED GSSPAVKNDF INRLLETGAT ESSSSNICSN QMEENGVNTS SQMTQTLYNL VAATEDLRCL KDELYPTVLR TNLGKDLCGQ
201: LALSELESEI KSFRGDLDDV LVKFKSLSRE LQSHRDADAK VRVDLKRIRG ELEDEVVELQ QCNGDLSALR AERDATAGAF FPVLSLGNKL ATSDRERDKQ
301: RDLQDMETVL KELTVLASGR LQQLKNLHEE RTKMLGKMSN LQNKSKSVRC ISSSQACLSL KDQLEKSKEA VFQYMALLEK LQVEKDSIVW KEREINIKNE
401: LGDVSRKTSA VTDSRMASLD SEIQKQLDEK MRIKTRLGNI SRERGRKEIF ADMKALISSF PEEMSSMRSQ LNNYKETAGG IHSLRADVQS LSGVLCRKTK
501: EYEALQLRSA DYASQLGDLN ATVCDLKNSH EELKLFLDMY KRESTDARDI AEAKEQEYRA WAHVQSLKSS LDEQNLELRV KAANEAEAVS QQMLAAAEAE
601: IADLRQKMDD CKRDVAKHSD ILKSKHEEHG TYLSEIQTIG SAYEDIVPQN QQLLLQVTER DDYNIKLFLE GITSRQMQDT LLIDKYIMDK DIQQGSAYAS
701: FLSKKSSRIE DQLRFCTDQF QKLAEDKYQK SVSLENLQKK RADIGNGLEQ ARSRLEESHS KVEQSRLDYG ALELELEIER FNRRRIEEEM EIAKKKVSRL
801: RSLIEGSSAI QKLRQELSEF KEILKCKACN DRPKEVVITK CYHLFCNPCV QKLTGTRQKK CPTCSASFGP NDIKPIYI
Arabidopsis Description
HUB1E3 ubiquitin-protein ligase BRE1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.