Factsheet for Zm00001d031643_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15299	Sorghum	cytosol	80.06	93.14
Zm00001d021033_P001	Maize	cytosol	36.52	91.55
Zm00001d044450_P001	Maize	cytosol	30.62	90.08
Zm00001d049854_P001	Maize	cytosol	33.99	88.32
TraesCS4D01G074300.1	Wheat	cytosol	70.79	82.35
TraesCS4B01G075600.1	Wheat	cytosol, nucleus, plastid	70.79	82.35
TraesCS4A01G239300.1	Wheat	cytosol, nucleus, plastid	70.51	82.03
Os11t0311300-03	Rice	cytosol	69.38	80.72
Zm00001d049855_P002	Maize	nucleus	46.63	76.85
HORVU4Hr1G012650.14	Barley	cytosol	70.51	74.48
GSMUA_Achr7P02490_001	Banana	cytosol	51.97	64.01
KRH01295	Soybean	plastid	14.89	58.89
PGSC0003DMT400019417	Potato	cytosol	49.72	58.42
Bra027816.1-P	Field mustard	cytosol	48.03	56.81
CDY63123	Canola	cytosol	48.03	56.81
AT1G60080.1	Thale cress	cytosol	48.03	56.62
CDY56983	Canola	cytosol	47.75	56.48
VIT_08s0007g08550.t01	Wine grape	cytosol	48.88	55.95
Solyc10g080130.1.1	Tomato	cytosol	48.31	55.84
Solyc06g075390.2.1	Tomato	nucleus	49.72	54.8
KRH16280	Soybean	nucleus	46.07	53.42
KRH45053	Soybean	cytosol, nucleus	45.22	53.31
PGSC0003DMT400060984	Potato	golgi	44.66	48.33
KRH01293	Soybean	cytosol, nucleus	16.01	45.97
CDY33620	Canola	cytosol	22.47	40.0
KRH01298	Soybean	cytosol, nucleus, plastid	12.08	38.74
Zm00001d045898_P001	Maize	cytosol, extracellular	12.36	28.76
Zm00001d014880_P002	Maize	extracellular	22.47	27.87
Zm00001d014882_P005	Maize	cytosol	20.79	27.51
Zm00001d042612_P001	Maize	plastid	16.85	23.81
Zm00001d002336_P001	Maize	cytosol	10.11	20.45
Zm00001d036997_P001	Maize	cytosol	13.76	18.22
Zm00001d016770_P002	Maize	nucleus	21.63	17.26
Zm00001d033842_P001	Maize	cytosol	12.92	14.65

Protein Annotations

EnsemblPlants:Zm00001d031643_P001	EnsemblPlants:Zm00001d031643_T001	EnsemblPlantsGene:Zm00001d031643	EntrezGene:100193137	InterPro:ExoRNase_PH_dom1	InterPro:ExoRNase_PH_dom2
InterPro:ExoRNase_PH_dom2_sf	InterPro:Ribosomal_S5_D2-typ_fold	PANTHER:PTHR11097	PANTHER:PTHR11097:SF20	PFAM:PF01138	PFAM:PF03725
ProteinID:ONM03350.1	SEG:seg	SUPFAM:SSF54211	SUPFAM:SSF55666	UniParc:UPI000844541A	UniProt:A0A1D6KK97
MapMan:16.8.1.1.4	:	:	:	:	:

Description

3'-5'-exoribonuclease family protein

Coordinates

chr1:+:197133007..197142004

Molecular Weight (calculated)

38897.3 Da

IEP (calculated)

6.057

GRAVY (calculated)

0.190

Length

356 amino acids

Sequence
(BLAST)

001: MAAETKPAAA SGVAGEMEVE AYRRLFPVAF LERHLGESVR IDARRLREAR PTTVALGAVS SAHGSALARL GDTAMLASVK LEVMSPPAEH PDEGSVAVEF
101: HMPPICSPLV RPGRPTDVAP VISKALEDVL TSSGMLNLKD LCLITGKASW LAYLDIYCLN ADGSLFDAAL ISAVAAFTHC RFLFFHFHLC KKTAIANTLT
201: VIENVKDWFY LLLPCLFLSN HYKFYVIFAV EIPLVSVGDD GRLFTVGGND GKNKFELVNR EKRKLTLGAI PLSLTCALHK DEILADPTSE EESIIETYVT
301: VVVDSSDRLV SLQKLGGAVT CMATIKECIS LAKERRRSLR EILLDSIKAM EVDQTE

Best Arabidopsis Sequence Match ( AT1G60080.1 )
(BLAST)

001: MGIPDAAQDL STEMEVDAFR RIFPLRFFER HLSESLRPDG RQLGKARDTI VNLGLVSTAD GSALAKIGST TMLAAIRMEV MTPSTDSPDE GCIAIEFHMP
101: PICSPTVRPG RPAEAAPVIS KRLSDTILSS GMIDLKELCL VSGKAAWMGY LDIYCLDADG ALFDAALLAA VAAFSNLQIP IVALNDNGRI VAVTGEKDQD
201: NALITEKEAV NKEKRKLTLK NIPFSLTCIL HKNYILADPT TEEESIMDTL VTVVLDSSDQ MVSFYKSGGA ALAYSSAIKS CVELARKRAK ELKQILGEMD
301: ID

Arabidopsis Description

3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.