Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049854_P001 | Maize | cytosol | 40.2 | 89.78 |
| Zm00001d021033_P001 | Maize | cytosol | 41.5 | 89.44 |
| Zm00001d044450_P001 | Maize | cytosol | 34.31 | 86.78 |
| TraesCS4D01G074300.1 | Wheat | cytosol | 85.62 | 85.62 |
| TraesCS4B01G075600.1 | Wheat | cytosol, nucleus, plastid | 85.62 | 85.62 |
| TraesCS4A01G239300.1 | Wheat | cytosol, nucleus, plastid | 85.29 | 85.29 |
| Os11t0311300-03 | Rice | cytosol | 82.35 | 82.35 |
| Zm00001d049855_P002 | Maize | nucleus | 56.86 | 80.56 |
| Zm00001d031643_P001 | Maize | cytosol | 93.14 | 80.06 |
| HORVU4Hr1G012650.14 | Barley | cytosol | 84.64 | 76.85 |
| GSMUA_Achr7P02490_001 | Banana | cytosol | 62.09 | 65.74 |
| KRH01295 | Soybean | plastid | 17.65 | 60.0 |
| PGSC0003DMT400019417 | Potato | cytosol | 58.5 | 59.08 |
| AT1G60080.1 | Thale cress | cytosol | 55.56 | 56.29 |
| Solyc10g080130.1.1 | Tomato | cytosol | 56.54 | 56.17 |
| VIT_08s0007g08550.t01 | Wine grape | cytosol | 56.86 | 55.95 |
| Bra027816.1-P | Field mustard | cytosol | 54.9 | 55.81 |
| CDY63123 | Canola | cytosol | 54.9 | 55.81 |
| CDY56983 | Canola | cytosol | 54.58 | 55.48 |
| Solyc06g075390.2.1 | Tomato | nucleus | 58.17 | 55.11 |
| KRH16280 | Soybean | nucleus | 54.9 | 54.72 |
| KRH45053 | Soybean | cytosol, nucleus | 53.92 | 54.64 |
| PGSC0003DMT400060984 | Potato | golgi | 52.29 | 48.63 |
| KRH01293 | Soybean | cytosol, nucleus | 18.63 | 45.97 |
| KRH01298 | Soybean | cytosol, nucleus, plastid | 14.71 | 40.54 |
| CDY33620 | Canola | cytosol | 26.47 | 40.5 |
| EER90439 | Sorghum | cytosol | 25.82 | 27.62 |
| OQU78915 | Sorghum | cytoskeleton, cytosol, nucleus | 25.49 | 27.18 |
| KXG30375 | Sorghum | nucleus | 25.82 | 17.59 |
Protein Annotations
| MapMan:16.8.1.1.4 | Gene3D:3.30.230.70 | EntrezGene:8060942 | UniProt:C5YHQ9 | EnsemblPlants:EES15299 | ProteinID:EES15299 |
| ProteinID:EES15299.1 | InterPro:ExoRNase_PH_dom1 | InterPro:ExoRNase_PH_dom2 | InterPro:ExoRNase_PH_dom2_sf | GO:GO:0000176 | GO:GO:0000177 |
| GO:GO:0000467 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0017091 | GO:GO:0034427 |
| GO:GO:0034473 | GO:GO:0034475 | GO:GO:0034476 | GO:GO:0043928 | GO:GO:0071028 | GO:GO:0071035 |
| GO:GO:0071038 | GO:GO:0071042 | InterPro:IPR027408 | PFAM:PF01138 | PFAM:PF03725 | InterPro:PNPase/RNase_PH_dom_sf |
| PANTHER:PTHR11097 | PANTHER:PTHR11097:SF20 | InterPro:Ribosomal_S5_D2-typ_fold | EnsemblPlantsGene:SORBI_3007G191600 | SUPFAM:SSF54211 | SUPFAM:SSF55666 |
| unigene:Sbi.13706 | UniParc:UPI0001A877D2 | RefSeq:XP_002445804.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:-:62433083..62439129
Molecular Weight (calculated)
32830.7 Da
IEP (calculated)
4.896
GRAVY (calculated)
0.136
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEAKPAAA SGVAGEMEVE AYRRLFPVAF LERHLGESVR IDARRLREAR PTTIALGAVS SAHGSALVRL GDTAMLASVK LEVMSPPAEH PDEGSVAVEF
101: HMPPICSPLV RPGRSAEVAP VISKALEDVL MSSGMLNLKD LCLITGKASW LAYLDIYCLN ADGSLFDAAL ISAVAAFTHL EIPLVSVGDD GRLFTVGGND
201: GKNKFELVNR EKRKLTLCDI PLSLTCALHK DSILADPTSE EESIIETYVT VVVDSSDRLV SLQKVGGAVT SMATIKECIS LAKERRQSLR EILIDSVKAM
301: EVDQTE
101: HMPPICSPLV RPGRSAEVAP VISKALEDVL MSSGMLNLKD LCLITGKASW LAYLDIYCLN ADGSLFDAAL ISAVAAFTHL EIPLVSVGDD GRLFTVGGND
201: GKNKFELVNR EKRKLTLCDI PLSLTCALHK DSILADPTSE EESIIETYVT VVVDSSDRLV SLQKVGGAVT SMATIKECIS LAKERRQSLR EILIDSVKAM
301: EVDQTE
001: MGIPDAAQDL STEMEVDAFR RIFPLRFFER HLSESLRPDG RQLGKARDTI VNLGLVSTAD GSALAKIGST TMLAAIRMEV MTPSTDSPDE GCIAIEFHMP
101: PICSPTVRPG RPAEAAPVIS KRLSDTILSS GMIDLKELCL VSGKAAWMGY LDIYCLDADG ALFDAALLAA VAAFSNLQIP IVALNDNGRI VAVTGEKDQD
201: NALITEKEAV NKEKRKLTLK NIPFSLTCIL HKNYILADPT TEEESIMDTL VTVVLDSSDQ MVSFYKSGGA ALAYSSAIKS CVELARKRAK ELKQILGEMD
301: ID
101: PICSPTVRPG RPAEAAPVIS KRLSDTILSS GMIDLKELCL VSGKAAWMGY LDIYCLDADG ALFDAALLAA VAAFSNLQIP IVALNDNGRI VAVTGEKDQD
201: NALITEKEAV NKEKRKLTLK NIPFSLTCIL HKNYILADPT TEEESIMDTL VTVVLDSSDQ MVSFYKSGGA ALAYSSAIKS CVELARKRAK ELKQILGEMD
301: ID
Arabidopsis Description
3'-5'-exoribonuclease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUI4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.